Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40394 | Soybean | extracellular, nucleus | 96.69 | 96.69 |
| KRH48075 | Soybean | extracellular | 84.5 | 84.85 |
| KRH06594 | Soybean | mitochondrion | 84.09 | 82.89 |
| KRH48076 | Soybean | extracellular | 79.13 | 80.8 |
| PGSC0003DMT400094734 | Potato | cytosol | 16.74 | 77.14 |
| VIT_15s0046g02000.t01 | Wine grape | extracellular, vacuole | 73.76 | 74.53 |
| PGSC0003DMT400055769 | Potato | extracellular | 73.35 | 74.42 |
| Solyc01g094970.2.1 | Tomato | extracellular | 61.36 | 72.97 |
| Solyc05g049980.2.1 | Tomato | extracellular | 72.52 | 72.22 |
| KRH59960 | Soybean | nucleus | 72.52 | 71.34 |
| KRG91587 | Soybean | cytosol, extracellular, plastid | 35.74 | 70.9 |
| PGSC0003DMT400000538 | Potato | extracellular | 69.42 | 70.74 |
| KRH41230 | Soybean | nucleus | 71.69 | 70.24 |
| Bra007609.1-P | Field mustard | extracellular | 68.18 | 70.21 |
| CDY65355 | Canola | extracellular | 68.39 | 70.13 |
| CDY48913 | Canola | extracellular | 68.18 | 70.06 |
| KRH35240 | Soybean | extracellular | 66.12 | 67.94 |
| KRH35239 | Soybean | extracellular, plasma membrane, plastid | 66.74 | 67.29 |
| GSMUA_Achr4P05580_001 | Banana | cytosol | 42.77 | 66.35 |
| KRH35238 | Soybean | extracellular | 63.43 | 65.88 |
| KRH08861 | Soybean | extracellular | 64.05 | 64.99 |
| KRH38380 | Soybean | extracellular | 63.64 | 64.71 |
| GSMUA_Achr11P... | Banana | cytosol | 41.32 | 64.1 |
| Zm00001d035899_P001 | Maize | extracellular | 63.22 | 62.96 |
| GSMUA_Achr11P... | Banana | cytosol | 39.46 | 62.62 |
| EER89047 | Sorghum | extracellular, vacuole | 63.84 | 62.42 |
| Os06t0106800-01 | Rice | extracellular | 61.57 | 61.44 |
| GSMUA_Achr11P... | Banana | extracellular | 60.33 | 61.34 |
| GSMUA_Achr3P27460_001 | Banana | extracellular, plastid | 24.79 | 59.7 |
| TraesCS5A01G513600.1 | Wheat | extracellular | 54.55 | 58.54 |
| Os03t0124900-01 | Rice | extracellular | 55.17 | 58.3 |
| AT3G61490.4 | Thale cress | cytosol, plastid | 70.45 | 57.89 |
| EER95599 | Sorghum | extracellular | 55.17 | 57.67 |
| TraesCS7D01G016300.2 | Wheat | extracellular | 57.85 | 57.26 |
| TraesCS7A01G019900.1 | Wheat | cytosol | 31.61 | 57.09 |
| Zm00001d027441_P001 | Maize | plasma membrane | 54.55 | 57.02 |
| TraesCS7A01G019500.1 | Wheat | cytosol | 30.99 | 55.97 |
| TraesCS4B01G344700.1 | Wheat | extracellular | 54.96 | 54.73 |
| TraesCS7A01G019400.1 | Wheat | extracellular, plastid, vacuole | 57.64 | 53.55 |
| TraesCSU01G066000.1 | Wheat | golgi, unclear | 57.85 | 53.23 |
| Zm00001d018548_P001 | Maize | cytosol | 25.0 | 52.16 |
| Zm00001d010681_P001 | Maize | cytosol | 29.55 | 50.53 |
| KRH69147 | Soybean | nucleus | 46.69 | 48.71 |
| KRG96607 | Soybean | extracellular | 46.9 | 48.5 |
| KRH68340 | Soybean | nucleus | 46.9 | 48.5 |
| KRH33649 | Soybean | nucleus | 46.07 | 48.06 |
| GSMUA_Achr7P24560_001 | Banana | cytosol, nucleus, vacuole | 17.15 | 47.16 |
| KRH45957 | Soybean | extracellular | 42.15 | 46.05 |
| KRG99037 | Soybean | nucleus | 41.74 | 45.7 |
| KRH69264 | Soybean | extracellular | 42.36 | 45.05 |
| KRH14547 | Soybean | extracellular | 41.32 | 44.84 |
| KRH50791 | Soybean | extracellular | 41.53 | 44.77 |
| KRH31843 | Soybean | extracellular | 42.15 | 44.74 |
| KRH02302 | Soybean | extracellular | 41.12 | 44.32 |
| KRH37050 | Soybean | extracellular, vacuole | 40.91 | 43.81 |
| KRH73576 | Soybean | extracellular | 24.38 | 42.75 |
| KRH12027 | Soybean | extracellular, vacuole | 40.5 | 41.61 |
| TraesCS7A01G019700.1 | Wheat | cytosol | 10.54 | 41.46 |
| KRH53903 | Soybean | extracellular, plasma membrane, plastid | 40.5 | 41.09 |
| KRH02590 | Soybean | extracellular, golgi, mitochondrion, plastid | 40.7 | 40.04 |
| KRH19342 | Soybean | endoplasmic reticulum | 40.5 | 39.92 |
| KRG96478 | Soybean | endoplasmic reticulum, extracellular | 39.67 | 39.83 |
| KRH55874 | Soybean | cytosol | 5.37 | 39.39 |
| KRH12568 | Soybean | plastid | 39.67 | 39.26 |
| KRH68221 | Soybean | extracellular | 40.08 | 39.03 |
| KRH37525 | Soybean | extracellular, plasma membrane | 39.26 | 38.46 |
| Solyc06g030520.1.1 | Tomato | cytosol | 8.26 | 35.09 |
| PGSC0003DMT400065330 | Potato | nucleus | 13.22 | 31.22 |
| KRH33610 | Soybean | plastid | 10.33 | 27.78 |
| KRG95330 | Soybean | extracellular, plasma membrane, vacuole | 23.35 | 24.25 |
Protein Annotations
| EntrezGene:100816232 | Gene3D:2.160.20.10 | MapMan:50.3.2 | UniProt:A0A0R0F3J1 | EMBL:ACUP02011479 | EnsemblPlantsGene:GLYMA_18G236700 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0071555 | InterPro:Glyco_hydro_28 | InterPro:IPR012334 | EnsemblPlants:KRH00832 | ProteinID:KRH00832 | ProteinID:KRH00832.1 |
| PFAM:PF00295 | PANTHER:PTHR31339 | PANTHER:PTHR31339:SF12 | InterPro:PbH1 | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence |
| SMART:SM00710 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | UniParc:UPI000189D972 | : | : |
Description
hypothetical protein
Coordinates
chr18:+:52558809..52562720
Molecular Weight (calculated)
53266.6 Da
IEP (calculated)
6.833
GRAVY (calculated)
-0.132
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLWKTHTR IHVIRTFFAI LLVALLSSER VESRKAKVVT TSLEYNAINC RAHSAALTDF GGVGDGKTSN TKAFQSAISH LSQYASEGGS QLYVPAGKWL
101: TGSFSLTSHF TLYLDKDAVL LASQDITEWP VLEPLPSYGR GRDAPAGRFT SLIFGTNLTD VIVTGENGTI DGQGEFWWQQ FHRKKLKYTR PYLIELMFSD
201: NIQISNLTLL NSPSWNVHPV YSSNIIVQGI TIYAPVTSPN TDGINPDSCT NVRIEDCYIV SGDDCVAVKS GWDEYGIKFG WPTKQLVIRR LTCISPYSAT
301: IALGSEMSGG IQDVRAEDIT AIQTESGVRI KTAVGRGGYV KDIYVKRMTL HTMKWAFKMT GDYNSHADGH YDPNALPEIK NINYRDVVAE NVTIAARFQG
401: ISNDPFTGIC IANVTLRMAA KAKKQPWTCT DIEGMTSGVT PPPCGLLPDQ GPEKITACDF PADNLPIDIV ELKKCTTTMT YVEV
101: TGSFSLTSHF TLYLDKDAVL LASQDITEWP VLEPLPSYGR GRDAPAGRFT SLIFGTNLTD VIVTGENGTI DGQGEFWWQQ FHRKKLKYTR PYLIELMFSD
201: NIQISNLTLL NSPSWNVHPV YSSNIIVQGI TIYAPVTSPN TDGINPDSCT NVRIEDCYIV SGDDCVAVKS GWDEYGIKFG WPTKQLVIRR LTCISPYSAT
301: IALGSEMSGG IQDVRAEDIT AIQTESGVRI KTAVGRGGYV KDIYVKRMTL HTMKWAFKMT GDYNSHADGH YDPNALPEIK NINYRDVVAE NVTIAARFQG
401: ISNDPFTGIC IANVTLRMAA KAKKQPWTCT DIEGMTSGVT PPPCGLLPDQ GPEKITACDF PADNLPIDIV ELKKCTTTMT YVEV
001: MSLFAITSAF SEDNVTAISS NQLIPLNDKI IANLIRSPNT QTKSLNLASS FLHSLSAYKY SYSLLLTSSS NHLASPHSQR AHKSQVILFL SLKHKHTQMY
101: KQTHHFCFQI YKTMKNILAC IVTIITLSNL ITISQGRRVS QSFETFEYTA IICRSHSASI TEYGGVGDGK TLNTKAFQSA VDHLSQYSSE GGAQLFVPAG
201: KWLTGSFNLT SHFTLFLHKD AILLAAQDLN EYPILKALPS YGRGRDAAGG RFASLIFGTN LSDVIITGNN GTIDGQGSFW WQKFHGGKLK YTRPYLIELM
301: FSDTIQISNL TFLDSPSWNI HPVYSSNIIV KGVTIIAPVK SPNTDGINPD SCTNTRIEDC YIISGDDCIA VKSGWDEYGI SFGMPTKHLV IRRLTCISPY
401: SAAIALGSEM SGGIEDVRAE DITAYQTESG VRIKTAVGRG AFVKNIYVKG MNLHTMKWVF WMTGNYKAHA DSHYDPHALP EITGINYRDI VAENVSMAGR
501: LEGISGDPFT GICISNATIS MAAKHKKAIW MCSDVEGVTS GVDPKPCDLL DGQESETTKK KMIDGGCDFP TDVLEIDNVE LKTCSYQMS
101: KQTHHFCFQI YKTMKNILAC IVTIITLSNL ITISQGRRVS QSFETFEYTA IICRSHSASI TEYGGVGDGK TLNTKAFQSA VDHLSQYSSE GGAQLFVPAG
201: KWLTGSFNLT SHFTLFLHKD AILLAAQDLN EYPILKALPS YGRGRDAAGG RFASLIFGTN LSDVIITGNN GTIDGQGSFW WQKFHGGKLK YTRPYLIELM
301: FSDTIQISNL TFLDSPSWNI HPVYSSNIIV KGVTIIAPVK SPNTDGINPD SCTNTRIEDC YIISGDDCIA VKSGWDEYGI SFGMPTKHLV IRRLTCISPY
401: SAAIALGSEM SGGIEDVRAE DITAYQTESG VRIKTAVGRG AFVKNIYVKG MNLHTMKWVF WMTGNYKAHA DSHYDPHALP EITGINYRDI VAENVSMAGR
501: LEGISGDPFT GICISNATIS MAAKHKKAIW MCSDVEGVTS GVDPKPCDLL DGQESETTKK KMIDGGCDFP TDVLEIDNVE LKTCSYQMS
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS88]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.