Factsheet for TraesCS7A01G019900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G019500.1	Wheat	cytosol	96.27	96.27
TraesCS7A01G019700.1	Wheat	cytosol	38.43	83.74
CDY10898	Canola	cytosol	12.69	66.67
GSMUA_Achr3P27460_001	Banana	extracellular, plastid	46.27	61.69
PGSC0003DMT400094734	Potato	cytosol	21.64	55.24
CDY69951	Canola	cytosol	23.13	49.21
TraesCSU01G066000.1	Wheat	golgi, unclear	86.57	44.11
GSMUA_Achr4P05580_001	Banana	cytosol	51.12	43.91
TraesCS7A01G019400.1	Wheat	extracellular, plastid, vacuole	85.07	43.76
Zm00001d035899_P001	Maize	extracellular	74.25	40.95
CDY70893	Canola	cytosol	52.61	39.39
Os06t0106800-01	Rice	extracellular	71.27	39.38
EER89047	Sorghum	extracellular, vacuole	72.39	39.19
CDY69255	Canola	cytosol	52.61	37.5
CDY10899	Canola	cytosol	13.06	36.46
TraesCS5A01G513600.1	Wheat	extracellular	55.6	33.04
Bra007609.1-P	Field mustard	extracellular	56.72	32.34
CDY48913	Canola	extracellular	56.72	32.27
CDY65355	Canola	extracellular	56.72	32.2
PGSC0003DMT400032104	Potato	extracellular	57.46	31.88
KRH00832	Soybean	nucleus	57.09	31.61
KRH48075	Soybean	extracellular	56.72	31.54
KRH40394	Soybean	extracellular, nucleus	56.72	31.41
VIT_15s0046g02000.t01	Wine grape	extracellular, vacuole	55.97	31.32
Solyc08g081480.2.1	Tomato	extracellular	56.34	31.26
KRH41230	Soybean	nucleus	57.46	31.17
KRH59960	Soybean	nucleus	57.09	31.1
PGSC0003DMT400055769	Potato	extracellular	55.22	31.03
CDY44105	Canola	cytosol, nucleus, plasma membrane	52.24	30.97
KRH06594	Soybean	mitochondrion	56.72	30.96
KRH48076	Soybean	extracellular	54.1	30.59
Solyc05g049980.2.1	Tomato	extracellular	55.22	30.45
VIT_02s0025g00260.t01	Wine grape	extracellular	54.48	30.42
PGSC0003DMT400000538	Potato	extracellular	52.99	29.89
AT4G23500.1	Thale cress	extracellular, plasma membrane	53.36	28.89
Bra019299.1-P	Field mustard	extracellular, plasma membrane	52.61	28.6
Bra013697.1-P	Field mustard	extracellular, plasma membrane	52.61	28.6
Solyc01g094970.2.1	Tomato	extracellular	41.04	27.03
AT3G61490.4	Thale cress	cytosol, plastid	55.6	25.3
Solyc06g030520.1.1	Tomato	cytosol	10.07	23.68
TraesCS4A01G358700.1	Wheat	extracellular	36.94	22.05
PGSC0003DMT400065330	Potato	nucleus	16.04	20.98
TraesCS4A01G168800.1	Wheat	extracellular, golgi, vacuole	32.84	19.26
TraesCS7A01G323800.3	Wheat	plastid	34.7	19.18
TraesCS5A01G090800.2	Wheat	extracellular, golgi, mitochondrion, plastid	33.21	18.78
TraesCS6A01G340000.1	Wheat	mitochondrion	33.96	18.38
TraesCS5A01G212900.1	Wheat	plastid	35.07	17.7
KRH33610	Soybean	plastid	8.21	12.22
TraesCS3A01G393600.1	Wheat	extracellular	15.3	9.03
TraesCS5A01G264400.2	Wheat	unclear	14.93	8.75

Protein Annotations

EnsemblPlants:TraesCS7A01G019900.1	EnsemblPlantsGene:TraesCS7A01G019900	Gene3D:2.160.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_28	InterPro:IPR012334
InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	PANTHER:PTHR31339	PANTHER:PTHR31339:SF7	PFAM:PF00295	SUPFAM:SSF51126
MapMan:50.3.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:8105174..8105980

Molecular Weight (calculated)

28994.2 Da

IEP (calculated)

5.114

GRAVY (calculated)

-0.324

Length

268 amino acids

Sequence
(BLAST)

001: MGRTHDILSG HSNQTHPKSP NTDGLNPDSC SQVRIEDCYV VSGDDCMAIK SGWDEYGIAV DMPSEHIVMR RLTRVSPTNA AITLGSEMSG GIQDVRAEDI
101: TAIGTESAVQ IKTAVGRGTY VRDVYARRMR LNGMKRVFWM TGDYKSHPDD DYDKTDVPVV ENISYQDVVA TGVWKEAARM QGIQSAPFKG ICMANVTAEM
201: IKERKVSWNC ANVEGVSAGV TPAPCTPLQG THAGSCPFPT DTLTIDQITV QQCSYSVASA TTSMAGTE

Best Arabidopsis Sequence Match ( AT3G61490.1 )
(BLAST)

001: MKNILACIVT IITLSNLITI SQGRRVSQSF ETFEYTAIIC RSHSASITEY GGVGDGKTLN TKAFQSAVDH LSQYSSEGGA QLFVPAGKWL TGSFNLTSHF
101: TLFLHKDAIL LAAQDLNEYP ILKALPSYGR GRDAAGGRFA SLIFGTNLSD VIITGNNGTI DGQGSFWWQK FHGGKLKYTR PYLIELMFSD TIQISNLTFL
201: DSPSWNIHPV YSSNIIVKGV TIIAPVKSPN TDGINPDSCT NTRIEDCYII SGDDCIAVKS GWDEYGISFG MPTKHLVIRR LTCISPYSAA IALGSEMSGG
301: IEDVRAEDIT AYQTESGVRI KTAVGRGAFV KNIYVKGMNL HTMKWVFWMT GNYKAHADSH YDPHALPEIT GINYRDIVAE NVSMAGRLEG ISGDPFTGIC
401: ISNATISMAA KHKKAIWMCS DVEGVTSGVD PKPCDLLDGQ ESETTKKKMI DGGCDFPTDV LEIDNVELKT CSYQMS

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS88]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.