CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035899_P001	Maize	extracellular	89.49	91.15
Os06t0106800-01	Rice	extracellular	84.44	86.19
CDY10898	Canola	cytosol	8.28	80.39
CDY69951	Canola	cytosol	19.8	77.78
GSMUA_Achr4P05580_001	Banana	cytosol	48.69	77.24
TraesCS7D01G016300.2	Wheat	extracellular	73.33	74.23
GSMUA_Achr3P27460_001	Banana	extracellular, plastid	30.1	74.13
TraesCS7A01G019900.1	Wheat	cytosol	39.19	72.39
TraesCS7A01G019500.1	Wheat	cytosol	38.38	70.9
TraesCS7A01G019400.1	Wheat	extracellular, plastid, vacuole	73.94	70.25
TraesCSU01G066000.1	Wheat	golgi, unclear	73.33	69.01
KRH59960	Soybean	nucleus	64.85	65.24
CDY70893	Canola	cytosol	47.07	65.08
Solyc01g094970.2.1	Tomato	extracellular	52.93	64.37
VIT_15s0046g02000.t01	Wine grape	extracellular, vacuole	62.02	64.09
KRH48075	Soybean	extracellular	62.22	63.9
KRH00832	Soybean	nucleus	62.42	63.84
KRH41230	Soybean	nucleus	63.64	63.77
PGSC0003DMT400055769	Potato	extracellular	61.41	63.73
VIT_02s0025g00260.t01	Wine grape	extracellular	61.62	63.54
KRH40394	Soybean	extracellular, nucleus	62.02	63.43
TraesCS7A01G019700.1	Wheat	cytosol	15.76	63.41
Bra007609.1-P	Field mustard	extracellular	60.0	63.19
CDY65355	Canola	extracellular	60.2	63.14
CDY48913	Canola	extracellular	60.0	63.06
CDY69255	Canola	cytosol	47.88	63.03
PGSC0003DMT400094734	Potato	cytosol	13.33	62.86
PGSC0003DMT400032104	Potato	extracellular	61.01	62.53
KRH06594	Soybean	mitochondrion	62.02	62.53
Solyc05g049980.2.1	Tomato	extracellular	61.21	62.35
Solyc08g081480.2.1	Tomato	extracellular	60.4	61.9
PGSC0003DMT400000538	Potato	extracellular	58.99	61.47
KRH48076	Soybean	extracellular	58.38	60.97
AT4G23500.1	Thale cress	extracellular, plasma membrane	60.2	60.2
Bra013697.1-P	Field mustard	extracellular, plasma membrane	59.19	59.43
Bra019299.1-P	Field mustard	extracellular, plasma membrane	59.19	59.43
CDY44105	Canola	cytosol, nucleus, plasma membrane	53.94	59.07
EER95599	Sorghum	extracellular	55.15	58.96
AT3G61490.4	Thale cress	cytosol, plastid	61.41	51.61
EES01085	Sorghum	extracellular	42.83	47.43
EER96131	Sorghum	extracellular, mitochondrion	46.87	46.49
EER90587	Sorghum	extracellular	44.44	46.32
EES04867	Sorghum	extracellular, plasma membrane	41.01	45.31
EES20030	Sorghum	extracellular	40.0	45.1
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	44.04	43.86
KXG29050	Sorghum	extracellular	38.38	42.13
CDY10899	Canola	cytosol	7.68	39.58
EES05901	Sorghum	extracellular, golgi	38.59	38.2
EER96790	Sorghum	plastid	38.79	37.07
Solyc06g030520.1.1	Tomato	cytosol	6.46	28.07
KRH33610	Soybean	plastid	9.7	26.67
PGSC0003DMT400065330	Potato	nucleus	10.1	24.39
EER99085	Sorghum	extracellular, plasma membrane	22.02	23.59

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	EntrezGene:8066875	UniProt:C5Z263	EnsemblPlants:EER89047	ProteinID:EER89047
ProteinID:EER89047.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31339
PANTHER:PTHR31339:SF7	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3010G005000
SUPFAM:SSF51126	unigene:Sbi.3725	SignalP:SignalP-noTM	UniParc:UPI0001A89993	RefSeq:XP_002437680.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:420012..423806

Molecular Weight (calculated)

52769.6 Da

IEP (calculated)

6.500

GRAVY (calculated)

-0.039

Length

495 amino acids

Sequence
(BLAST)

001: MALRTLHLNA PPLLHILRSL CLLVLAASAA VSVSGRHHAP TPAHGTGQSM YLAPACRAHT ASLADFGGVG DGTTSNTAAF RSAVDHLSQY SGEDAGGAML
101: YVPAGKWLTG PFNLTSHFTL FLHSDAVILA SQDINEWPII DPLPSYGRGR DKIGGRFASL VGGSNLTDVV ITGNNGTIDG QGAMWWSKFH KNQLKYTRGY
201: LIELMHSDTI YISNLTLLNS PAWNIHPVYS SNIVVQGITI LAPTNSPNTD GINPDSCSHV RIEDCYIVSG DDCVAIKSGW DEYGISYGMP SQHIVIRRLT
301: CVSPTSAVIA LGSEMSGGIQ DVRAEDITAI NSESGVRIKT AVGRGAYVKD VFVRRMTLTT MKWVFWMTGN YKSHPDDKYD PNAIPVVDNI SYQDVVATGV
401: YKEAARLEGI QGAPFKGICV ANVTADLSKS RKYPWTCADV EGVSVNVSPA PCQPLQGAHD GACPFPTDTL PIDQVTVQQC AYDVPGGTGA SGGGN

Best Arabidopsis Sequence Match ( AT3G61490.4 )
(BLAST)

001: MSLFAITSAF SEDNVTAISS NQLIPLNDKI IANLIRSPNT QTKSLNLASS FLHSLSAYKY SYSLLLTSSS NHLASPHSQR AHKSQVILFL SLKHKHTQMY
101: KQTHHFCFQI YKTMKNILAC IVTIITLSNL ITISQGRRVS QSFETFEYTA IICRSHSASI TEYGGVGDGK TLNTKAFQSA VDHLSQYSSE GGAQLFVPAG
201: KWLTGSFNLT SHFTLFLHKD AILLAAQDLN EYPILKALPS YGRGRDAAGG RFASLIFGTN LSDVIITGNN GTIDGQGSFW WQKFHGGKLK YTRPYLIELM
301: FSDTIQISNL TFLDSPSWNI HPVYSSNIIV KGVTIIAPVK SPNTDGINPD SCTNTRIEDC YIISGDDCIA VKSGWDEYGI SFGMPTKHLV IRRLTCISPY
401: SAAIALGSEM SGGIEDVRAE DITAYQTESG VRIKTAVGRG AFVKNIYVKG MNLHTMKWVF WMTGNYKAHA DSHYDPHALP EITGINYRDI VAENVSMAGR
501: LEGISGDPFT GICISNATIS MAAKHKKAIW MCSDVEGVTS GVDPKPCDLL DGQESETTKK KMIDGGCDFP TDVLEIDNVE LKTCSYQMS

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS88]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.