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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 3
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007609.1-P Field mustard extracellular 99.36 99.57
CDY65355 Canola extracellular 97.03 96.82
CDY69951 Canola cytosol 20.81 77.78
PGSC0003DMT400094734 Potato cytosol 16.56 74.29
AT3G61490.4 Thale cress cytosol, plastid 91.51 73.17
PGSC0003DMT400055769 Potato extracellular 73.46 72.54
Solyc05g049980.2.1 Tomato extracellular 73.25 70.99
CDY10898 Canola cytosol 7.64 70.59
Solyc01g094970.2.1 Tomato extracellular 60.93 70.52
KRH48075 Soybean extracellular 71.34 69.71
KRH00832 Soybean nucleus 70.06 68.18
KRH40394 Soybean extracellular, nucleus 69.85 67.98
VIT_15s0046g02000.t01 Wine grape extracellular, vacuole 69.0 67.85
KRH06594 Soybean mitochondrion 70.49 67.62
PGSC0003DMT400000538 Potato extracellular 68.15 67.58
KRH48076 Soybean extracellular 67.94 67.51
CDY70893 Canola cytosol 50.32 66.2
GSMUA_Achr4P05580_001 Banana cytosol 42.46 64.1
CDY69255 Canola cytosol 51.17 64.1
GSMUA_Achr11P... Banana cytosol 40.34 60.9
Os06t0106800-01 Rice extracellular 62.21 60.41
GSMUA_Achr11P... Banana cytosol 39.07 60.33
CDY44105 Canola cytosol, nucleus, plasma membrane 57.75 60.18
EER89047 Sorghum extracellular, vacuole 63.06 60.0
CDY05885 Canola extracellular 59.02 59.91
Zm00001d035899_P001 Maize extracellular 61.15 59.26
GSMUA_Achr11P... Banana extracellular 59.24 58.61
TraesCS5A01G513600.1 Wheat extracellular 55.84 58.31
TraesCS7D01G016300.2 Wheat extracellular 60.3 58.08
CDY08095 Canola extracellular, plasma membrane 60.72 57.78
GSMUA_Achr3P27460_001 Banana extracellular, plastid 24.63 57.71
CDY20264 Canola extracellular 57.96 57.11
CDY39678 Canola extracellular 57.75 56.9
TraesCS7A01G019900.1 Wheat cytosol 32.27 56.72
CDY05907 Canola cytosol 52.65 56.62
Os03t0124900-01 Rice extracellular 54.99 56.55
TraesCS7A01G019500.1 Wheat cytosol 32.06 56.34
Zm00001d027441_P001 Maize plasma membrane 54.99 55.94
CDY08113 Canola extracellular 53.93 55.7
EER95599 Sorghum extracellular 54.56 55.51
TraesCS7A01G019400.1 Wheat extracellular, plastid, vacuole 59.87 54.13
TraesCSU01G066000.1 Wheat golgi, unclear 60.3 53.99
TraesCS4B01G344700.1 Wheat extracellular 55.2 53.5
CDY10899 Canola cytosol 10.19 50.0
Zm00001d018548_P001 Maize cytosol 24.63 50.0
Zm00001d010681_P001 Maize cytosol 29.3 48.76
GSMUA_Achr7P24560_001 Banana cytosol, nucleus, vacuole 17.62 47.16
CDY10897 Canola cytosol, extracellular, peroxisome 23.14 45.61
TraesCS7A01G019700.1 Wheat cytosol 11.89 45.53
CDX67875 Canola extracellular, golgi 43.52 44.76
CDY25090 Canola extracellular, golgi 43.1 44.32
CDY47619 Canola extracellular, vacuole 41.61 44.14
CDY03516 Canola extracellular, vacuole 41.61 44.14
CDY11403 Canola extracellular, plasma membrane 43.1 44.13
CDY13383 Canola extracellular 41.19 43.6
CDY10970 Canola extracellular, vacuole 41.61 43.46
CDX94222 Canola extracellular 41.4 43.24
CDX67513 Canola extracellular 40.98 43.18
CDX76617 Canola extracellular, plasma membrane 41.83 42.83
CDY54633 Canola extracellular 40.34 42.41
CDX92101 Canola extracellular, golgi 40.55 41.98
CDY53228 Canola extracellular 9.98 41.96
CDY33922 Canola extracellular 39.49 41.89
CDX82390 Canola extracellular 39.92 41.87
CDX95899 Canola extracellular 40.13 41.72
CDY46115 Canola extracellular 41.4 41.23
CDX75352 Canola extracellular 40.55 40.47
CDX68976 Canola extracellular 39.92 39.92
CDY08036 Canola cytosol, nucleus, vacuole 31.85 39.79
CDX72404 Canola extracellular 39.92 39.75
CDX74085 Canola cytoskeleton, cytosol, vacuole 31.85 39.47
CDY56436 Canola extracellular, vacuole 38.85 38.61
CDY05643 Canola extracellular, plasma membrane, plastid 39.07 38.49
CDX86247 Canola plasma membrane, plastid 39.49 37.13
CDX71719 Canola mitochondrion 12.53 35.98
CDY27797 Canola extracellular, mitochondrion, plastid 38.22 35.93
CDY41934 Canola extracellular, mitochondrion, plastid 38.22 35.86
CDX96676 Canola extracellular, golgi, plastid 37.58 34.91
CDX83782 Canola extracellular, golgi, plastid 37.58 34.91
Solyc06g030520.1.1 Tomato cytosol 8.28 34.21
PGSC0003DMT400065330 Potato nucleus 12.53 28.78
CDY02392 Canola extracellular, plasma membrane, vacuole 23.14 22.8
CDY12962 Canola extracellular, plasma membrane, vacuole 23.14 22.8
CDY11375 Canola mitochondrion 21.02 19.53
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078III1UniProt:A0A078III1EnsemblPlants:CDY48913ProteinID:CDY48913
ProteinID:CDY48913.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00091999001InterPro:Glyco_hydro_28InterPro:IPR012334
PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF12InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSUPFAM:SSF51126
SignalP:SignalP-noTMUniParc:UPI0004EF2864SEG:seg:::
Description
BnaA09g39240DBnaA09g39240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078III1]
Coordinates
chrLK032801:-:8081..10617
Molecular Weight (calculated)
51534.4 Da
IEP (calculated)
6.638
GRAVY (calculated)
-0.124
Length
471 amino acids
Sequence
(BLAST)
001: MKNILSCIVT IITLSFLTTN AQGRKVSQSY ETYEYTAITC RSHSASITDF GGVGDGKTLN TKAFQSAVDH LSQYSSDGGA QLFVPAGKWL TGSFSLTSHF
101: TLFLHKDATL LAAQDLEEYP VLKALPSYGR GRDAAGGRFA SLVFGTNLSD VIITGNNGTI DGRGSFWWQK FHGGKLKYTR PYLIELMFSD TIQISNITLI
201: DSPSWNIHPV YSSNIIVKGV TIIAPVKSPN TDGINPDSCT NTRIEDCYII SGDDCVAVKS GWDEYGISFG MPTKHLIIRR LTCISPYSAA IALGSEMSGG
301: IEDVRAEEIT AYQTESGVRI KTAVGRGAFV RNVYVRGMRL HTMKWVFWMT GNYKAHADSH YDPHALPEIT GINYRDIVAE NVSMAGRLEG ISGDPFKGIC
401: ISNATISMAV KHKKVMWMCS DVEGVTSGVD PKPCDLLDGK QEKKMDGGCE FPSDVLEIDN VELKSCSYQM N
Best Arabidopsis Sequence Match ( AT3G61490.4 )
(BLAST)
001: MSLFAITSAF SEDNVTAISS NQLIPLNDKI IANLIRSPNT QTKSLNLASS FLHSLSAYKY SYSLLLTSSS NHLASPHSQR AHKSQVILFL SLKHKHTQMY
101: KQTHHFCFQI YKTMKNILAC IVTIITLSNL ITISQGRRVS QSFETFEYTA IICRSHSASI TEYGGVGDGK TLNTKAFQSA VDHLSQYSSE GGAQLFVPAG
201: KWLTGSFNLT SHFTLFLHKD AILLAAQDLN EYPILKALPS YGRGRDAAGG RFASLIFGTN LSDVIITGNN GTIDGQGSFW WQKFHGGKLK YTRPYLIELM
301: FSDTIQISNL TFLDSPSWNI HPVYSSNIIV KGVTIIAPVK SPNTDGINPD SCTNTRIEDC YIISGDDCIA VKSGWDEYGI SFGMPTKHLV IRRLTCISPY
401: SAAIALGSEM SGGIEDVRAE DITAYQTESG VRIKTAVGRG AFVKNIYVKG MNLHTMKWVF WMTGNYKAHA DSHYDPHALP EITGINYRDI VAENVSMAGR
501: LEGISGDPFT GICISNATIS MAAKHKKAIW MCSDVEGVTS GVDPKPCDLL DGQESETTKK KMIDGGCDFP TDVLEIDNVE LKTCSYQMS
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS88]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.