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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035299.1-P Field mustard extracellular, plasma membrane, vacuole 100.0 100.0
CDY12962 Canola extracellular, plasma membrane, vacuole 98.74 98.74
AT3G57790.1 Thale cress extracellular, plasma membrane, vacuole 87.24 85.1
Solyc03g051770.2.1 Tomato cytosol 44.77 67.94
KRG95330 Soybean extracellular, plasma membrane, vacuole 65.06 66.74
VIT_08s0007g07880.t01 Wine grape extracellular, plasma membrane 63.81 63.41
Os09t0487600-01 Rice extracellular 58.37 61.05
EER99085 Sorghum extracellular, plasma membrane 58.58 60.61
TraesCS3D01G387300.1 Wheat unclear 57.32 60.35
TraesCS3A01G393600.1 Wheat extracellular 57.32 60.35
PGSC0003DMT400033674 Potato extracellular, plasma membrane 59.83 60.08
TraesCS5D01G271900.1 Wheat extracellular, plasma membrane, vacuole 57.32 59.96
HORVU3Hr1G088950.1 Barley extracellular 56.9 59.91
Zm00001d020931_P001 Maize extracellular 58.16 59.78
GSMUA_Achr3P11090_001 Banana extracellular 57.95 59.7
TraesCS5A01G264400.2 Wheat unclear 56.69 59.3
HORVU5Hr1G073070.1 Barley extracellular, plasma membrane, vacuole 55.86 57.54
TraesCS5B01G263700.2 Wheat extracellular, plasma membrane 55.44 57.36
CDY53228 Canola extracellular 7.53 32.14
CDY69951 Canola cytosol 7.11 26.98
CDX67513 Canola extracellular 22.8 24.38
CDY47619 Canola extracellular, vacuole 22.59 24.32
CDY03516 Canola extracellular, vacuole 22.59 24.32
CDY13383 Canola extracellular 22.59 24.27
CDY70893 Canola cytosol 17.99 24.02
CDY10970 Canola extracellular, vacuole 22.59 23.95
CDX94222 Canola extracellular 22.59 23.95
CDY11403 Canola extracellular, plasma membrane 22.59 23.48
CDY20264 Canola extracellular 23.43 23.43
CDY65355 Canola extracellular 23.01 23.31
CDY05885 Canola extracellular 22.59 23.28
CDY39678 Canola extracellular 23.22 23.22
CDX67875 Canola extracellular, golgi 22.18 23.14
CDY48913 Canola extracellular 22.8 23.14
CDY69255 Canola cytosol 18.2 23.14
CDX75352 Canola extracellular 22.8 23.09
CDX76617 Canola extracellular, plasma membrane 22.18 23.04
CDX68976 Canola extracellular 22.59 22.93
CDY25090 Canola extracellular, golgi 21.76 22.71
CDX72404 Canola extracellular 22.38 22.62
CDY05907 Canola cytosol 20.71 22.6
CDY54633 Canola extracellular 21.13 22.54
CDY46115 Canola extracellular 22.18 22.41
CDY08113 Canola extracellular 21.34 22.37
CDX82390 Canola extracellular 20.92 22.27
CDY44105 Canola cytosol, nucleus, plasma membrane 20.92 22.12
CDY27797 Canola extracellular, mitochondrion, plastid 23.01 21.96
CDY41934 Canola extracellular, mitochondrion, plastid 23.01 21.91
CDY08095 Canola extracellular, plasma membrane 22.59 21.82
CDX92101 Canola extracellular, golgi 20.71 21.76
CDY33922 Canola extracellular 19.87 21.4
CDX71719 Canola mitochondrion 7.32 21.34
CDX74085 Canola cytoskeleton, cytosol, vacuole 16.95 21.32
CDY08036 Canola cytosol, nucleus, vacuole 16.74 21.22
CDX95899 Canola extracellular 20.08 21.19
CDX83782 Canola extracellular, golgi, plastid 22.18 20.91
CDX96676 Canola extracellular, golgi, plastid 22.18 20.91
CDY56436 Canola extracellular, vacuole 20.5 20.68
CDY05643 Canola extracellular, plasma membrane, plastid 20.29 20.29
CDX86247 Canola plasma membrane, plastid 20.5 19.56
CDY10899 Canola cytosol 3.77 18.75
CDY10897 Canola cytosol, extracellular, peroxisome 9.21 18.41
CDY10898 Canola cytosol 1.67 15.69
CDY11375 Canola mitochondrion 11.51 10.85
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078EML5EnsemblPlants:CDY02392ProteinID:CDY02392ProteinID:CDY02392.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00113941001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339
PANTHER:PTHR31339:SF10InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI000253E5D8
SEG:seg:::::
Description
BnaA02g23010D
Coordinates
chrLK031934:+:393530..395202
Molecular Weight (calculated)
52672.2 Da
IEP (calculated)
5.380
GRAVY (calculated)
-0.072
Length
478 amino acids
Sequence
(BLAST)
001: MDFPLLLRSI LLPLCLLFSV IQSRPYTSSQ KIQLPGDSLA LSVADFGATG DGIHYDTSAI QSAINACNHH YTSSSSICRV KFPLGTYLTA KLHLRSGVLL
101: DVTENAVLLG GPRIEDYPAE TSSEWYVVVA NNATDVGITG GGAIDGQGSK FVVRFDERKN VMVSWNQTGA CLGDECRPRL VGFVDSTNVH IWNITLRDPA
201: YWCLHIVRCE NTSVHDVSIL GDFNTPNNDG IDIEDSNNTF ITRCHIDTGD DAICPKTYVA PLYNLTVTDC WIRTKSSAIK LGSASWFEFK SLVFDNITIS
301: ESHRGLGMQI RDGGNVNGIT FSNMNISTRY YDPSWWGRAE PIYITTCPRD SSSKEGSISN LLFVNITIVS ENGVFLSGSP NGLLTDIKFK NMNITLRRWS
401: NYTSGLVDYR PGCQGLMNHS ATAGIIMEHV NGFSVENVDL KWSDDNLNAW NVPLEFRPST VNNVSFVGFS SGLLHEIV
Best Arabidopsis Sequence Match ( AT3G57790.2 )
(BLAST)
001: MMGSILLLLL FFSLVQSRSD TSYSKIQLPG DSLTLSVTDF GATGDGINYD TSAIQSTIDA CNRHYTSFSS ICRVVFPSGN YLTAKLHLRS GVILDVTENA
101: VLLGGPRIED YYPAETSSDW YVVVANNATD VGITGGGAID GQGSKFVVRF DEKKNVMVSW NQTGACLGDE CRPRLVGFVD SINVEIWNIT LREPAYWCLH
201: IVRCENTSVH DVSILGDFNT PNNDGIDIED SNNTVITRCH IDTGDDAICP KTYTGPLYNL TATDCWIRTK SSAIKLGSAS WFDFKGLVFD NITIFESHRG
301: LGMQIRDGGN VSDVTFSNIN ISTRYYDPSW WGRAEPIYIT TCPRDSSAKE GSISNLLFVN ITIDSENGVF LSGSPNGLLS DIKFKNMNLT FRRWSNYSAG
401: LVDYRPGCQG LVNHRATSGI IMEHVNGFRV ENVDLKWSDD DDVNAAWNVP LEFRPSTVNN VSFVGFTSGL YTKLFESDYV MVGENNIAFA
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J3I0]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.