Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY70893 | Canola | cytosol | 92.71 | 24.86 |
TraesCS7A01G019700.1 | Wheat | cytosol | 31.25 | 24.39 |
CDY69255 | Canola | cytosol | 93.75 | 23.94 |
CDY44105 | Canola | cytosol, nucleus, plasma membrane | 98.96 | 21.02 |
GSMUA_Achr3P27460_001 | Banana | extracellular, plastid | 43.75 | 20.9 |
GSMUA_Achr11P... | Banana | cytosol | 52.08 | 16.39 |
GSMUA_Achr11P... | Banana | cytosol | 51.04 | 15.71 |
GSMUA_Achr4P05580_001 | Banana | cytosol | 45.83 | 14.1 |
TraesCS7A01G019900.1 | Wheat | cytosol | 36.46 | 13.06 |
TraesCS7A01G019500.1 | Wheat | cytosol | 35.42 | 12.69 |
CDY05885 | Canola | extracellular | 57.29 | 11.85 |
CDY05907 | Canola | cytosol | 53.12 | 11.64 |
CDY08095 | Canola | extracellular, plasma membrane | 59.38 | 11.52 |
CDY08113 | Canola | extracellular | 54.17 | 11.4 |
GSMUA_Achr11P... | Banana | extracellular | 51.04 | 10.29 |
CDY48913 | Canola | extracellular | 50.0 | 10.19 |
CDY65355 | Canola | extracellular | 50.0 | 10.17 |
CDY39678 | Canola | extracellular | 50.0 | 10.04 |
CDY20264 | Canola | extracellular | 50.0 | 10.04 |
TraesCS5A01G513600.1 | Wheat | extracellular | 44.79 | 9.53 |
Os03t0124900-01 | Rice | extracellular | 42.71 | 8.95 |
Zm00001d027441_P001 | Maize | plasma membrane | 42.71 | 8.86 |
TraesCS4B01G344700.1 | Wheat | extracellular | 44.79 | 8.85 |
Os06t0106800-01 | Rice | extracellular | 42.71 | 8.45 |
EER95599 | Sorghum | extracellular | 39.58 | 8.21 |
EER89047 | Sorghum | extracellular, vacuole | 39.58 | 7.68 |
Zm00001d035899_P001 | Maize | extracellular | 38.54 | 7.61 |
TraesCS7D01G016300.2 | Wheat | extracellular | 37.5 | 7.36 |
TraesCS7A01G019400.1 | Wheat | extracellular, plastid, vacuole | 37.5 | 6.91 |
TraesCSU01G066000.1 | Wheat | golgi, unclear | 37.5 | 6.84 |
CDX67875 | Canola | extracellular, golgi | 29.17 | 6.11 |
CDY11403 | Canola | extracellular, plasma membrane | 29.17 | 6.09 |
CDY25090 | Canola | extracellular, golgi | 28.12 | 5.9 |
CDX75352 | Canola | extracellular | 28.12 | 5.72 |
CDY46115 | Canola | extracellular | 27.08 | 5.5 |
CDX76617 | Canola | extracellular, plasma membrane | 26.04 | 5.43 |
CDX72404 | Canola | extracellular | 26.04 | 5.29 |
CDY54633 | Canola | extracellular | 23.96 | 5.13 |
CDX68976 | Canola | extracellular | 25.0 | 5.1 |
CDY47619 | Canola | extracellular, vacuole | 22.92 | 4.95 |
CDY03516 | Canola | extracellular, vacuole | 22.92 | 4.95 |
CDX82390 | Canola | extracellular | 22.92 | 4.9 |
CDY10970 | Canola | extracellular, vacuole | 22.92 | 4.88 |
CDX94222 | Canola | extracellular | 22.92 | 4.88 |
CDY08036 | Canola | cytosol, nucleus, vacuole | 18.75 | 4.77 |
CDX74085 | Canola | cytoskeleton, cytosol, vacuole | 18.75 | 4.74 |
CDY13383 | Canola | extracellular | 21.88 | 4.72 |
CDX67513 | Canola | extracellular | 21.88 | 4.7 |
CDY33922 | Canola | extracellular | 20.83 | 4.5 |
CDX95899 | Canola | extracellular | 20.83 | 4.42 |
CDX92101 | Canola | extracellular, golgi | 20.83 | 4.4 |
CDY05643 | Canola | extracellular, plasma membrane, plastid | 20.83 | 4.18 |
CDY56436 | Canola | extracellular, vacuole | 18.75 | 3.8 |
CDY02392 | Canola | extracellular, plasma membrane, vacuole | 18.75 | 3.77 |
CDY12962 | Canola | extracellular, plasma membrane, vacuole | 18.75 | 3.77 |
CDX86247 | Canola | plasma membrane, plastid | 18.75 | 3.59 |
CDX71719 | Canola | mitochondrion | 5.21 | 3.05 |
CDY27797 | Canola | extracellular, mitochondrion, plastid | 14.58 | 2.79 |
CDY41934 | Canola | extracellular, mitochondrion, plastid | 14.58 | 2.79 |
KRH33610 | Soybean | plastid | 5.21 | 2.78 |
CDX83782 | Canola | extracellular, golgi, plastid | 14.58 | 2.76 |
CDX96676 | Canola | extracellular, golgi, plastid | 14.58 | 2.76 |
CDY11375 | Canola | mitochondrion | 7.29 | 1.38 |
Zm00001d010681_P001 | Maize | cytosol | 3.12 | 1.06 |
CDY10897 | Canola | cytosol, extracellular, peroxisome | 1.04 | 0.42 |
CDY69951 | Canola | cytosol | 0.0 | 0.0 |
CDY53228 | Canola | extracellular | 0.0 | 0.0 |
GSMUA_Achr7P24560_001 | Banana | cytosol, nucleus, vacuole | 0.0 | 0.0 |
Zm00001d018548_P001 | Maize | cytosol | 0.0 | 0.0 |
CDY10898 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:CDY10899 | EnsemblPlantsGene:GSBRNA2T00048803001 | InterPro:Pectin_lyase_fold/virulence | PANTHER:PTHR31339 | PANTHER:PTHR31339:SF7 | ProteinID:CDY10899 |
ProteinID:CDY10899.1 | SUPFAM:SSF51126 | UniParc:UPI0004EE8E9F | UniProt:A0A078FD82 | MapMan:35.1 | : |
Description
BnaC01g15140DBnaC01g15140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD82]
Coordinates
chrLK032007:+:756045..756403
Molecular Weight (calculated)
10498.8 Da
IEP (calculated)
8.202
GRAVY (calculated)
-0.104
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MVAENVTMPA QLAGIAGDQF TGICISNVTI TLSKKPKKVL WNCTDVSGYT SGVTPEPCQL LPEKQPGTVV PCNFPESSIP IDEVKLQRCY SRRRLM
001: MTSLSTAGYL LLLLLLPISY DGGFIGAADA EHDLRATDLH NHRHRRHRNH HRGEEFEYSA ISCRAYSASL DEFGAVGDGV TSNTAAFRDA VSQLSRFADY
101: GGSLLFVPAG RWLTGNFNLT SHFTLFLHRD AVILASQEES DYEVIEPLPS YGRGRDTDGG RFISLLFGSN LTDVVITGEN GTIDGQGEPW WGKFKRGELK
201: YTRPYLIEIM HSDGIQISNL TFLNSPSWHI HPVYSSNIYI QGLTILAPVT VPNTDGINPD SCTNTRIEDC YIVSGDDCIA VKSGWDQYGI NYGMPTKQLL
301: IRRLTCISPD SAVIALGSEM SGGIEDVRAE DIVAINSESG IRIKTAIGRG GYVKDVYVRG MTMMTMKYVF WMTGSYGSHP DDHYDPKALP VIQNINYQDM
401: VAENVTMPAQ LAGISGDQFT GICISNVTIT LSKKPKKVLW NCTDVSGYTS GVTPQPCQLL PEKQPGTVVP CNFPEDPIPI DEVKLQRCYS RRRNM
101: GGSLLFVPAG RWLTGNFNLT SHFTLFLHRD AVILASQEES DYEVIEPLPS YGRGRDTDGG RFISLLFGSN LTDVVITGEN GTIDGQGEPW WGKFKRGELK
201: YTRPYLIEIM HSDGIQISNL TFLNSPSWHI HPVYSSNIYI QGLTILAPVT VPNTDGINPD SCTNTRIEDC YIVSGDDCIA VKSGWDQYGI NYGMPTKQLL
301: IRRLTCISPD SAVIALGSEM SGGIEDVRAE DIVAINSESG IRIKTAIGRG GYVKDVYVRG MTMMTMKYVF WMTGSYGSHP DDHYDPKALP VIQNINYQDM
401: VAENVTMPAQ LAGISGDQFT GICISNVTIT LSKKPKKVLW NCTDVSGYTS GVTPQPCQLL PEKQPGTVVP CNFPEDPIPI DEVKLQRCYS RRRNM
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O81746]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.