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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70893 Canola cytosol 92.71 24.86
TraesCS7A01G019700.1 Wheat cytosol 31.25 24.39
CDY69255 Canola cytosol 93.75 23.94
CDY44105 Canola cytosol, nucleus, plasma membrane 98.96 21.02
GSMUA_Achr3P27460_001 Banana extracellular, plastid 43.75 20.9
GSMUA_Achr11P... Banana cytosol 52.08 16.39
GSMUA_Achr11P... Banana cytosol 51.04 15.71
GSMUA_Achr4P05580_001 Banana cytosol 45.83 14.1
TraesCS7A01G019900.1 Wheat cytosol 36.46 13.06
TraesCS7A01G019500.1 Wheat cytosol 35.42 12.69
CDY05885 Canola extracellular 57.29 11.85
CDY05907 Canola cytosol 53.12 11.64
CDY08095 Canola extracellular, plasma membrane 59.38 11.52
CDY08113 Canola extracellular 54.17 11.4
GSMUA_Achr11P... Banana extracellular 51.04 10.29
CDY48913 Canola extracellular 50.0 10.19
CDY65355 Canola extracellular 50.0 10.17
CDY39678 Canola extracellular 50.0 10.04
CDY20264 Canola extracellular 50.0 10.04
TraesCS5A01G513600.1 Wheat extracellular 44.79 9.53
Os03t0124900-01 Rice extracellular 42.71 8.95
Zm00001d027441_P001 Maize plasma membrane 42.71 8.86
TraesCS4B01G344700.1 Wheat extracellular 44.79 8.85
Os06t0106800-01 Rice extracellular 42.71 8.45
EER95599 Sorghum extracellular 39.58 8.21
EER89047 Sorghum extracellular, vacuole 39.58 7.68
Zm00001d035899_P001 Maize extracellular 38.54 7.61
TraesCS7D01G016300.2 Wheat extracellular 37.5 7.36
TraesCS7A01G019400.1 Wheat extracellular, plastid, vacuole 37.5 6.91
TraesCSU01G066000.1 Wheat golgi, unclear 37.5 6.84
CDX67875 Canola extracellular, golgi 29.17 6.11
CDY11403 Canola extracellular, plasma membrane 29.17 6.09
CDY25090 Canola extracellular, golgi 28.12 5.9
CDX75352 Canola extracellular 28.12 5.72
CDY46115 Canola extracellular 27.08 5.5
CDX76617 Canola extracellular, plasma membrane 26.04 5.43
CDX72404 Canola extracellular 26.04 5.29
CDY54633 Canola extracellular 23.96 5.13
CDX68976 Canola extracellular 25.0 5.1
CDY47619 Canola extracellular, vacuole 22.92 4.95
CDY03516 Canola extracellular, vacuole 22.92 4.95
CDX82390 Canola extracellular 22.92 4.9
CDY10970 Canola extracellular, vacuole 22.92 4.88
CDX94222 Canola extracellular 22.92 4.88
CDY08036 Canola cytosol, nucleus, vacuole 18.75 4.77
CDX74085 Canola cytoskeleton, cytosol, vacuole 18.75 4.74
CDY13383 Canola extracellular 21.88 4.72
CDX67513 Canola extracellular 21.88 4.7
CDY33922 Canola extracellular 20.83 4.5
CDX95899 Canola extracellular 20.83 4.42
CDX92101 Canola extracellular, golgi 20.83 4.4
CDY05643 Canola extracellular, plasma membrane, plastid 20.83 4.18
CDY56436 Canola extracellular, vacuole 18.75 3.8
CDY02392 Canola extracellular, plasma membrane, vacuole 18.75 3.77
CDY12962 Canola extracellular, plasma membrane, vacuole 18.75 3.77
CDX86247 Canola plasma membrane, plastid 18.75 3.59
CDX71719 Canola mitochondrion 5.21 3.05
CDY27797 Canola extracellular, mitochondrion, plastid 14.58 2.79
CDY41934 Canola extracellular, mitochondrion, plastid 14.58 2.79
KRH33610 Soybean plastid 5.21 2.78
CDX83782 Canola extracellular, golgi, plastid 14.58 2.76
CDX96676 Canola extracellular, golgi, plastid 14.58 2.76
CDY11375 Canola mitochondrion 7.29 1.38
Zm00001d010681_P001 Maize cytosol 3.12 1.06
CDY10897 Canola cytosol, extracellular, peroxisome 1.04 0.42
CDY69951 Canola cytosol 0.0 0.0
CDY53228 Canola extracellular 0.0 0.0
GSMUA_Achr7P24560_001 Banana cytosol, nucleus, vacuole 0.0 0.0
Zm00001d018548_P001 Maize cytosol 0.0 0.0
CDY10898 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY10899EnsemblPlantsGene:GSBRNA2T00048803001InterPro:Pectin_lyase_fold/virulencePANTHER:PTHR31339PANTHER:PTHR31339:SF7ProteinID:CDY10899
ProteinID:CDY10899.1SUPFAM:SSF51126UniParc:UPI0004EE8E9FUniProt:A0A078FD82MapMan:35.1:
Description
BnaC01g15140DBnaC01g15140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD82]
Coordinates
chrLK032007:+:756045..756403
Molecular Weight (calculated)
10498.8 Da
IEP (calculated)
8.202
GRAVY (calculated)
-0.104
Length
96 amino acids
Sequence
(BLAST)
1: MVAENVTMPA QLAGIAGDQF TGICISNVTI TLSKKPKKVL WNCTDVSGYT SGVTPEPCQL LPEKQPGTVV PCNFPESSIP IDEVKLQRCY SRRRLM
Best Arabidopsis Sequence Match ( AT4G23500.1 )
(BLAST)
001: MTSLSTAGYL LLLLLLPISY DGGFIGAADA EHDLRATDLH NHRHRRHRNH HRGEEFEYSA ISCRAYSASL DEFGAVGDGV TSNTAAFRDA VSQLSRFADY
101: GGSLLFVPAG RWLTGNFNLT SHFTLFLHRD AVILASQEES DYEVIEPLPS YGRGRDTDGG RFISLLFGSN LTDVVITGEN GTIDGQGEPW WGKFKRGELK
201: YTRPYLIEIM HSDGIQISNL TFLNSPSWHI HPVYSSNIYI QGLTILAPVT VPNTDGINPD SCTNTRIEDC YIVSGDDCIA VKSGWDQYGI NYGMPTKQLL
301: IRRLTCISPD SAVIALGSEM SGGIEDVRAE DIVAINSESG IRIKTAIGRG GYVKDVYVRG MTMMTMKYVF WMTGSYGSHP DDHYDPKALP VIQNINYQDM
401: VAENVTMPAQ LAGISGDQFT GICISNVTIT LSKKPKKVLW NCTDVSGYTS GVTPQPCQLL PEKQPGTVVP CNFPEDPIPI DEVKLQRCYS RRRNM
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O81746]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.