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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol 91.03 93.11
GSMUA_Achr4P05580_001 Banana cytosol 69.55 69.55
GSMUA_Achr11P... Banana extracellular 94.55 61.97
CDY70893 Canola cytosol 60.9 53.07
CDY10899 Canola cytosol 15.71 51.04
CDY69255 Canola cytosol 60.9 50.53
PGSC0003DMT400094734 Potato cytosol 16.67 49.52
GSMUA_Achr3P27460_001 Banana extracellular, plastid 30.45 47.26
CDY69951 Canola cytosol 18.27 45.24
VIT_15s0046g02000.t01 Wine grape extracellular, vacuole 65.38 42.59
KRH59960 Soybean nucleus 66.99 42.48
VIT_02s0025g00260.t01 Wine grape extracellular 65.06 42.29
CDY44105 Canola cytosol, nucleus, plasma membrane 61.22 42.26
KRH41230 Soybean nucleus 66.67 42.11
Solyc08g081480.2.1 Tomato extracellular 65.06 42.03
PGSC0003DMT400032104 Potato extracellular 64.42 41.61
PGSC0003DMT400055769 Potato extracellular 63.46 41.51
KRH00832 Soybean nucleus 64.1 41.32
KRH40394 Soybean extracellular, nucleus 63.78 41.12
KRH48075 Soybean extracellular 63.46 41.08
CDY65355 Canola extracellular 61.86 40.89
KRH48076 Soybean extracellular 61.54 40.51
Bra007609.1-P Field mustard extracellular 60.9 40.43
CDY48913 Canola extracellular 60.9 40.34
Solyc05g049980.2.1 Tomato extracellular 62.82 40.33
Solyc01g094970.2.1 Tomato extracellular 52.56 40.29
PGSC0003DMT400000538 Potato extracellular 60.9 40.0
GSMUA_Achr8P06180_001 Banana extracellular 50.32 39.95
KRH06594 Soybean mitochondrion 62.82 39.92
AT4G23500.1 Thale cress extracellular, plasma membrane 62.82 39.6
CDY10898 Canola cytosol 6.41 39.22
Bra013697.1-P Field mustard extracellular, plasma membrane 61.54 38.95
Bra019299.1-P Field mustard extracellular, plasma membrane 61.54 38.95
GSMUA_AchrUn_... Banana extracellular 48.08 38.17
GSMUA_Achr4P15650_001 Banana extracellular, plasma membrane, vacuole 45.51 34.98
GSMUA_Achr4P08470_001 Banana extracellular 44.55 33.82
GSMUA_Achr6P14280_001 Banana cytosol 43.27 33.58
AT3G61490.4 Thale cress cytosol, plastid 62.82 33.28
GSMUA_Achr8P19900_001 Banana cytosol 43.59 32.77
GSMUA_Achr10P... Banana cytosol 42.31 32.04
GSMUA_Achr5P00100_001 Banana cytosol, extracellular, plastid 41.99 31.04
GSMUA_Achr2P08050_001 Banana cytosol, extracellular, golgi, mitochondrion 43.91 31.0
GSMUA_Achr11P... Banana extracellular, vacuole 41.35 28.99
GSMUA_Achr7P24560_001 Banana cytosol, nucleus, vacuole 16.35 28.98
Solyc06g030520.1.1 Tomato cytosol 10.26 28.07
GSMUA_Achr3P10280_001 Banana mitochondrion 41.99 27.35
GSMUA_Achr8P23620_001 Banana extracellular, golgi, mitochondrion, plasma membrane 42.63 26.65
GSMUA_Achr9P18190_001 Banana mitochondrion 41.67 26.48
PGSC0003DMT400065330 Potato nucleus 16.99 25.85
GSMUA_Achr11P... Banana mitochondrion 40.38 25.66
GSMUA_Achr5P22120_001 Banana extracellular 39.74 25.2
GSMUA_Achr11P... Banana extracellular 41.35 23.5
GSMUA_Achr11P... Banana cytosol 41.03 19.34
KRH33610 Soybean plastid 9.29 16.11
GSMUA_Achr3P11090_001 Banana extracellular 19.87 13.36
Protein Annotations
EnsemblPlants:GSMUA_Achr11P02900_001EnsemblPlants:GSMUA_Achr11T02900_001EnsemblPlantsGene:GSMUA_Achr11G02900_001Gene3D:2.160.20.10GO:GO:0003674GO:GO:0003824
GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798
InterPro:Glyco_hydro_28InterPro:IPR012334InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulencePANTHER:PTHR31339PANTHER:PTHR31339:SF7
PFAM:PF00295SUPFAM:SSF51126UniParc:UPI000294E967UniProt:M0RNX0MapMan:50.3.2:
Description
Probable polygalacturonase [Source:GMGC_GENE;Acc:GSMUA_Achr11G02900_001]
Coordinates
chr11:+:2105676..2107232
Molecular Weight (calculated)
34677.4 Da
IEP (calculated)
4.973
GRAVY (calculated)
-0.140
Length
312 amino acids
Sequence
(BLAST)
001: MLVQDINEWP IIDPLPSYGR GRDTAGGRYS NLIMGYNLTD VVITGHNGTV DGQGETWWEM FNNKELNYTR GYLIELMYCR QVLISNITLV NSPSWNVHPV
101: YSSQVIVSGI TILAPVNSPN TDGINPDSSS NVRIEDCYIV SGDDCIAIKS GWDEYGIAFN MIKTAIGRGA YVKDIFVRRM NLHTMKWVFW MTGTYGQHPD
201: DKFDPKAIPV VQNISYSNVV AENVTMAAKL EGIPGAPFTG ICIYNVTAEV VRSKKPIWNC TDVEGVSSHV TPTPCALIPE SPDRITHCPF PEDVLPVDCV
301: GLKECSYQRT KP
Best Arabidopsis Sequence Match ( AT3G61490.4 )
(BLAST)
001: MSLFAITSAF SEDNVTAISS NQLIPLNDKI IANLIRSPNT QTKSLNLASS FLHSLSAYKY SYSLLLTSSS NHLASPHSQR AHKSQVILFL SLKHKHTQMY
101: KQTHHFCFQI YKTMKNILAC IVTIITLSNL ITISQGRRVS QSFETFEYTA IICRSHSASI TEYGGVGDGK TLNTKAFQSA VDHLSQYSSE GGAQLFVPAG
201: KWLTGSFNLT SHFTLFLHKD AILLAAQDLN EYPILKALPS YGRGRDAAGG RFASLIFGTN LSDVIITGNN GTIDGQGSFW WQKFHGGKLK YTRPYLIELM
301: FSDTIQISNL TFLDSPSWNI HPVYSSNIIV KGVTIIAPVK SPNTDGINPD SCTNTRIEDC YIISGDDCIA VKSGWDEYGI SFGMPTKHLV IRRLTCISPY
401: SAAIALGSEM SGGIEDVRAE DITAYQTESG VRIKTAVGRG AFVKNIYVKG MNLHTMKWVF WMTGNYKAHA DSHYDPHALP EITGINYRDI VAENVSMAGR
501: LEGISGDPFT GICISNATIS MAAKHKKAIW MCSDVEGVTS GVDPKPCDLL DGQESETTKK KMIDGGCDFP TDVLEIDNVE LKTCSYQMS
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS88]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.