Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 2
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41230 | Soybean | nucleus | 96.34 | 95.95 |
| VIT_02s0025g00260.t01 | Wine grape | extracellular | 78.25 | 80.21 |
| KRH40394 | Soybean | extracellular, nucleus | 71.54 | 72.73 |
| KRH00832 | Soybean | nucleus | 71.34 | 72.52 |
| KRH06594 | Soybean | mitochondrion | 72.36 | 72.51 |
| KRH48075 | Soybean | extracellular | 70.33 | 71.78 |
| KRH48076 | Soybean | extracellular | 68.7 | 71.31 |
| KRG91587 | Soybean | cytosol, extracellular, plastid | 35.16 | 70.9 |
| GSMUA_Achr4P05580_001 | Banana | cytosol | 43.7 | 68.91 |
| KRH35240 | Soybean | extracellular | 65.24 | 68.15 |
| KRH35239 | Soybean | extracellular, plasma membrane, plastid | 65.45 | 67.08 |
| GSMUA_Achr11P... | Banana | cytosol | 42.48 | 66.99 |
| GSMUA_Achr11P... | Banana | cytosol | 40.85 | 65.9 |
| Os06t0106800-01 | Rice | extracellular | 64.23 | 65.15 |
| EER89047 | Sorghum | extracellular, vacuole | 65.24 | 64.85 |
| KRH38380 | Soybean | extracellular | 62.6 | 64.71 |
| KRH35238 | Soybean | extracellular | 61.18 | 64.59 |
| KRH08861 | Soybean | extracellular | 62.6 | 64.57 |
| Zm00001d035899_P001 | Maize | extracellular | 63.21 | 63.99 |
| GSMUA_Achr11P... | Banana | extracellular | 61.79 | 63.87 |
| GSMUA_Achr3P27460_001 | Banana | extracellular, plastid | 26.02 | 63.68 |
| Os03t0124900-01 | Rice | extracellular | 56.1 | 60.26 |
| TraesCS5A01G513600.1 | Wheat | extracellular | 55.08 | 60.09 |
| TraesCS7D01G016300.2 | Wheat | extracellular | 58.33 | 58.69 |
| Zm00001d027441_P001 | Maize | plasma membrane | 55.08 | 58.53 |
| EER95599 | Sorghum | extracellular | 55.08 | 58.53 |
| TraesCS7A01G019900.1 | Wheat | cytosol | 31.1 | 57.09 |
| TraesCS4B01G344700.1 | Wheat | extracellular | 55.69 | 56.38 |
| TraesCS7A01G019400.1 | Wheat | extracellular, plastid, vacuole | 58.54 | 55.28 |
| TraesCS7A01G019500.1 | Wheat | cytosol | 29.88 | 54.85 |
| TraesCSU01G066000.1 | Wheat | golgi, unclear | 58.54 | 54.75 |
| Zm00001d018548_P001 | Maize | cytosol | 25.41 | 53.88 |
| Zm00001d010681_P001 | Maize | cytosol | 30.28 | 52.65 |
| KRG96607 | Soybean | extracellular | 47.15 | 49.57 |
| KRH68340 | Soybean | nucleus | 46.95 | 49.36 |
| KRH69147 | Soybean | nucleus | 45.73 | 48.49 |
| KRH33649 | Soybean | nucleus | 45.33 | 48.06 |
| KRH55874 | Soybean | cytosol | 6.3 | 46.97 |
| KRH45957 | Soybean | extracellular | 42.07 | 46.73 |
| KRH14547 | Soybean | extracellular | 42.28 | 46.64 |
| KRG99037 | Soybean | nucleus | 41.87 | 46.61 |
| KRH50791 | Soybean | extracellular | 42.28 | 46.33 |
| KRH02302 | Soybean | extracellular | 42.07 | 46.1 |
| GSMUA_Achr7P24560_001 | Banana | cytosol, nucleus, vacuole | 16.46 | 46.02 |
| KRH69264 | Soybean | extracellular | 42.48 | 45.93 |
| KRH37050 | Soybean | extracellular, vacuole | 41.67 | 45.35 |
| KRH31843 | Soybean | extracellular | 41.87 | 45.18 |
| TraesCS7A01G019700.1 | Wheat | cytosol | 11.18 | 44.72 |
| KRH73576 | Soybean | extracellular | 24.8 | 44.2 |
| KRH12027 | Soybean | extracellular, vacuole | 41.67 | 43.52 |
| KRG96478 | Soybean | endoplasmic reticulum, extracellular | 41.67 | 42.53 |
| KRH53903 | Soybean | extracellular, plasma membrane, plastid | 40.85 | 42.14 |
| KRH68221 | Soybean | extracellular | 41.67 | 41.25 |
| KRH02590 | Soybean | extracellular, golgi, mitochondrion, plastid | 40.85 | 40.85 |
| KRH19342 | Soybean | endoplasmic reticulum | 40.65 | 40.73 |
| KRH12568 | Soybean | plastid | 39.63 | 39.88 |
| KRH37525 | Soybean | extracellular, plasma membrane | 39.84 | 39.68 |
| KRH33610 | Soybean | plastid | 10.16 | 27.78 |
| KRG95330 | Soybean | extracellular, plasma membrane, vacuole | 23.37 | 24.68 |
Protein Annotations
| EntrezGene:100785841 | Gene3D:2.160.20.10 | MapMan:50.3.2 | EMBL:ACUP02003345 | EnsemblPlantsGene:GLYMA_05G210900 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | InterPro:Glyco_hydro_28 | UniProt:I1K6E9 | InterPro:IPR012334 | EnsemblPlants:KRH59960 | ProteinID:KRH59960 |
| ProteinID:KRH59960.1 | PFAM:PF00295 | PANTHER:PTHR31339 | PANTHER:PTHR31339:SF7 | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence |
| SUPFAM:SSF51126 | TMHMM:TMhelix | UniParc:UPI0002955E57 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:+:39264534..39267537
Molecular Weight (calculated)
54008.6 Da
IEP (calculated)
5.169
GRAVY (calculated)
-0.093
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPYEKIPIA QRRTCSPSKR IKVMDMLLLL CVLLVALPNL AVVESRRAPV LDYFEYCAMS CRAYSASLEE FGGVGDGTTL NTKAFQAAID HLSQYASSGG
101: SQLYVPPGKW LTGSFNLTSH FTLFLHKDAV ILASQDENDW PVIDPLPSYG RGRDTQGGRF SSLIFGTNLT DVIITGDNGT IDGQGDLWWQ KFRKGELKYT
201: RPYLIEIMYS DNVQISNLTL VNSPSWNVHP IYSSNLVVQG ITILAPVTSP NTDGINPDSC TNTRIEDCYI VSGDDCVAVK SGWDEYGIAY GMPTKQLVIR
301: RLTCISPFSA VIALGSEMSG GIQDVRAEDI VAINSESGVR IKTAVGRGGY VKDIFVRRMT MKTMKWAFWM TGNYGSHADD NYDPNALPVI QNINYRDMVA
401: ENVTMAARLE GISGDPFTGI CISNVTIQLA KKAKKVPWTC TDIAGISSDV TPAPCGLLPD QGEEKIGACT FPEESLPIED IKVQTCTYRR NL
101: SQLYVPPGKW LTGSFNLTSH FTLFLHKDAV ILASQDENDW PVIDPLPSYG RGRDTQGGRF SSLIFGTNLT DVIITGDNGT IDGQGDLWWQ KFRKGELKYT
201: RPYLIEIMYS DNVQISNLTL VNSPSWNVHP IYSSNLVVQG ITILAPVTSP NTDGINPDSC TNTRIEDCYI VSGDDCVAVK SGWDEYGIAY GMPTKQLVIR
301: RLTCISPFSA VIALGSEMSG GIQDVRAEDI VAINSESGVR IKTAVGRGGY VKDIFVRRMT MKTMKWAFWM TGNYGSHADD NYDPNALPVI QNINYRDMVA
401: ENVTMAARLE GISGDPFTGI CISNVTIQLA KKAKKVPWTC TDIAGISSDV TPAPCGLLPD QGEEKIGACT FPEESLPIED IKVQTCTYRR NL
001: MTSLSTAGYL LLLLLLPISY DGGFIGAADA EHDLRATDLH NHRHRRHRNH HRGEEFEYSA ISCRAYSASL DEFGAVGDGV TSNTAAFRDA VSQLSRFADY
101: GGSLLFVPAG RWLTGNFNLT SHFTLFLHRD AVILASQEES DYEVIEPLPS YGRGRDTDGG RFISLLFGSN LTDVVITGEN GTIDGQGEPW WGKFKRGELK
201: YTRPYLIEIM HSDGIQISNL TFLNSPSWHI HPVYSSNIYI QGLTILAPVT VPNTDGINPD SCTNTRIEDC YIVSGDDCIA VKSGWDQYGI NYGMPTKQLL
301: IRRLTCISPD SAVIALGSEM SGGIEDVRAE DIVAINSESG IRIKTAIGRG GYVKDVYVRG MTMMTMKYVF WMTGSYGSHP DDHYDPKALP VIQNINYQDM
401: VAENVTMPAQ LAGISGDQFT GICISNVTIT LSKKPKKVLW NCTDVSGYTS GVTPQPCQLL PEKQPGTVVP CNFPEDPIPI DEVKLQRCYS RRRNM
101: GGSLLFVPAG RWLTGNFNLT SHFTLFLHRD AVILASQEES DYEVIEPLPS YGRGRDTDGG RFISLLFGSN LTDVVITGEN GTIDGQGEPW WGKFKRGELK
201: YTRPYLIEIM HSDGIQISNL TFLNSPSWHI HPVYSSNIYI QGLTILAPVT VPNTDGINPD SCTNTRIEDC YIVSGDDCIA VKSGWDQYGI NYGMPTKQLL
301: IRRLTCISPD SAVIALGSEM SGGIEDVRAE DIVAINSESG IRIKTAIGRG GYVKDVYVRG MTMMTMKYVF WMTGSYGSHP DDHYDPKALP VIQNINYQDM
401: VAENVTMPAQ LAGISGDQFT GICISNVTIT LSKKPKKVLW NCTDVSGYTS GVTPQPCQLL PEKQPGTVVP CNFPEDPIPI DEVKLQRCYS RRRNM
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O81746]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.