Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g051770.2.1 | Tomato | cytosol | 49.14 | 72.7 |
| CDY12962 | Canola | extracellular, plasma membrane, vacuole | 67.17 | 65.48 |
| Bra035299.1-P | Field mustard | extracellular, plasma membrane, vacuole | 66.74 | 65.06 |
| CDY02392 | Canola | extracellular, plasma membrane, vacuole | 66.74 | 65.06 |
| VIT_08s0007g07880.t01 | Wine grape | extracellular, plasma membrane | 66.95 | 64.86 |
| PGSC0003DMT400033674 | Potato | extracellular, plasma membrane | 65.24 | 63.87 |
| TraesCS5D01G271900.1 | Wheat | extracellular, plasma membrane, vacuole | 62.45 | 63.68 |
| Os09t0487600-01 | Rice | extracellular | 62.23 | 63.46 |
| AT3G57790.1 | Thale cress | extracellular, plasma membrane, vacuole | 66.31 | 63.06 |
| TraesCS5A01G264400.2 | Wheat | unclear | 61.59 | 62.8 |
| TraesCS3A01G393600.1 | Wheat | extracellular | 61.16 | 62.78 |
| TraesCS3D01G387300.1 | Wheat | unclear | 60.94 | 62.56 |
| Zm00001d020931_P001 | Maize | extracellular | 62.02 | 62.15 |
| EER99085 | Sorghum | extracellular, plasma membrane | 61.59 | 62.12 |
| HORVU5Hr1G073070.1 | Barley | extracellular, plasma membrane, vacuole | 61.8 | 62.07 |
| GSMUA_Achr3P11090_001 | Banana | extracellular | 61.59 | 61.85 |
| TraesCS5B01G263700.2 | Wheat | extracellular, plasma membrane | 60.94 | 61.47 |
| HORVU3Hr1G088950.1 | Barley | extracellular | 59.44 | 61.01 |
| KRH35238 | Soybean | extracellular | 23.82 | 23.82 |
| KRG91587 | Soybean | cytosol, extracellular, plastid | 12.45 | 23.77 |
| KRH48075 | Soybean | extracellular | 24.46 | 23.65 |
| KRH59960 | Soybean | nucleus | 24.68 | 23.37 |
| KRH00832 | Soybean | nucleus | 24.25 | 23.35 |
| KRH12568 | Soybean | plastid | 24.46 | 23.31 |
| KRH37525 | Soybean | extracellular, plasma membrane | 24.68 | 23.28 |
| KRH06594 | Soybean | mitochondrion | 24.46 | 23.22 |
| KRH48076 | Soybean | extracellular | 23.61 | 23.21 |
| KRH02302 | Soybean | extracellular | 22.32 | 23.16 |
| KRH40394 | Soybean | extracellular, nucleus | 24.03 | 23.14 |
| KRH69264 | Soybean | extracellular | 22.53 | 23.08 |
| KRH19342 | Soybean | endoplasmic reticulum | 24.25 | 23.01 |
| KRH02590 | Soybean | extracellular, golgi, mitochondrion, plastid | 24.25 | 22.97 |
| KRH35240 | Soybean | extracellular | 23.18 | 22.93 |
| KRH35239 | Soybean | extracellular, plasma membrane, plastid | 23.61 | 22.92 |
| KRH41230 | Soybean | nucleus | 24.25 | 22.87 |
| KRH69147 | Soybean | nucleus | 22.75 | 22.84 |
| KRH33649 | Soybean | nucleus | 22.75 | 22.84 |
| KRH50791 | Soybean | extracellular | 21.89 | 22.72 |
| KRG96607 | Soybean | extracellular | 22.75 | 22.65 |
| KRH31843 | Soybean | extracellular | 22.1 | 22.59 |
| KRH68340 | Soybean | nucleus | 22.53 | 22.44 |
| KRH38380 | Soybean | extracellular | 22.75 | 22.27 |
| KRH37050 | Soybean | extracellular, vacuole | 21.24 | 21.9 |
| KRH73576 | Soybean | extracellular | 12.88 | 21.74 |
| KRH53903 | Soybean | extracellular, plasma membrane, plastid | 22.1 | 21.59 |
| KRH08861 | Soybean | extracellular | 22.1 | 21.59 |
| KRH55874 | Soybean | cytosol | 3.0 | 21.21 |
| KRH14547 | Soybean | extracellular | 20.17 | 21.08 |
| KRH12027 | Soybean | extracellular, vacuole | 21.24 | 21.02 |
| KRH45957 | Soybean | extracellular | 19.74 | 20.77 |
| KRG99037 | Soybean | nucleus | 19.31 | 20.36 |
| KRG96478 | Soybean | endoplasmic reticulum, extracellular | 21.03 | 20.33 |
| KRH33610 | Soybean | plastid | 7.51 | 19.44 |
| KRH68221 | Soybean | extracellular | 20.6 | 19.32 |
Protein Annotations
| EntrezGene:100794954 | Gene3D:2.160.20.10 | MapMan:50.3.2 | EMBL:ACUP02012102 | EnsemblPlantsGene:GLYMA_19G143700 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0071555 |
| InterPro:Glyco_hydro_28 | UniProt:I1N942 | InterPro:IPR012334 | EnsemblPlants:KRG95330 | ProteinID:KRG95330 | ProteinID:KRG95330.1 |
| PFAM:PF00295 | PANTHER:PTHR31339 | PANTHER:PTHR31339:SF10 | InterPro:PbH1 | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence |
| SMART:SM00710 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | UniParc:UPI000233EA2E | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr19:-:40491413..40494398
Molecular Weight (calculated)
51768.2 Da
IEP (calculated)
5.139
GRAVY (calculated)
-0.158
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKSILLLLL FFLLNPSLLA TSHPLNPIPV TLSVADFGAA GDGLRYDTEA IQSAINSCPE GDPCHVTFPA PGKYLTATVF LKSGVVLNVE SGATILGGTR
101: LEDYPEESWR WYVVVAENAT DVGIRGGGAV DGQAAKFVVR EDPRKNVMVS WNQTGACLGD ECRPRLIGFL DCNNVQVSNI TLNQPAYWCL HLVRSNNICI
201: QDIAIYGDFN IPNNDGIDIE DSNNTVITRC HIDTGDDAIC PKSSTGPVYN LTVTDCWIRS KSSAIKLGSA SWFDFKHFVF DNIAIVDSHR GIGFQIRDGG
301: NVSDIVFSNM NISTRYYDSL WWGRAEPIYV TSCPRDSSSK EASISNVLFI NITANSENGI FLSGSKRGLL RNLRFIDMDI TYRRFTNYAG GLLDYRPGCQ
401: ELVKHRTAGI MMEHIEGLEV KNVEMRWSND QLEQWNNPLE FRPSTVNNIS FLNFNSGLYT NSKSNY
101: LEDYPEESWR WYVVVAENAT DVGIRGGGAV DGQAAKFVVR EDPRKNVMVS WNQTGACLGD ECRPRLIGFL DCNNVQVSNI TLNQPAYWCL HLVRSNNICI
201: QDIAIYGDFN IPNNDGIDIE DSNNTVITRC HIDTGDDAIC PKSSTGPVYN LTVTDCWIRS KSSAIKLGSA SWFDFKHFVF DNIAIVDSHR GIGFQIRDGG
301: NVSDIVFSNM NISTRYYDSL WWGRAEPIYV TSCPRDSSSK EASISNVLFI NITANSENGI FLSGSKRGLL RNLRFIDMDI TYRRFTNYAG GLLDYRPGCQ
401: ELVKHRTAGI MMEHIEGLEV KNVEMRWSND QLEQWNNPLE FRPSTVNNIS FLNFNSGLYT NSKSNY
001: MMGSILLLLL FFSLVQSRSD TSYSKIQLPG DSLTLSVTDF GATGDGINYD TSAIQSTIDA CNRHYTSFSS ICRVVFPSGN YLTAKLHLRS GVILDVTENA
101: VLLGGPRIED YYPAETSSDW YVVVANNATD VGITGGGAID GQGSKFVVRF DEKKNVMVSW NQTGACLGDE CRPRLVGFVD SINVEIWNIT LREPAYWCLH
201: IVRCENTSVH DVSILGDFNT PNNDGIDIED SNNTVITRCH IDTGDDAICP KTYTGPLYNL TATDCWIRTK SSAIKLGSAS WFDFKGLVFD NITIFESHRG
301: LGMQIRDGGN VSDVTFSNIN ISTRYYDPSW WGRAEPIYIT TCPRDSSAKE GSISNLLFVN ITIDSENGVF LSGSPNGLLS DIKFKNMNLT FRRWSNYSAG
401: LVDYRPGCQG LVNHRATSGI IMEHVNGFRV ENVDLKWSDD DDVNAAWNVP LEFRPSTVNN VSFVGFTSGL YTKLFESDYV MVGENNIAFA
101: VLLGGPRIED YYPAETSSDW YVVVANNATD VGITGGGAID GQGSKFVVRF DEKKNVMVSW NQTGACLGDE CRPRLVGFVD SINVEIWNIT LREPAYWCLH
201: IVRCENTSVH DVSILGDFNT PNNDGIDIED SNNTVITRCH IDTGDDAICP KTYTGPLYNL TATDCWIRTK SSAIKLGSAS WFDFKGLVFD NITIFESHRG
301: LGMQIRDGGN VSDVTFSNIN ISTRYYDPSW WGRAEPIYIT TCPRDSSAKE GSISNLLFVN ITIDSENGVF LSGSPNGLLS DIKFKNMNLT FRRWSNYSAG
401: LVDYRPGCQG LVNHRATSGI IMEHVNGFRV ENVDLKWSDD DDVNAAWNVP LEFRPSTVNN VSFVGFTSGL YTKLFESDYV MVGENNIAFA
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J3I0]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.