CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
mitochondrion 2
extracellular 3
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35240	Soybean	extracellular	81.55	80.68
KRH35239	Soybean	extracellular, plasma membrane, plastid	82.83	80.42
KRG91587	Soybean	cytosol, extracellular, plastid	41.2	78.69
KRH38380	Soybean	extracellular	75.75	74.16
KRH08861	Soybean	extracellular	75.75	74.0
KRH48075	Soybean	extracellular	68.24	65.98
Solyc03g007950.2.1	Tomato	extracellular	64.16	64.03
Bra018004.1-P	Field mustard	cytosol	59.87	63.84
KRH48076	Soybean	extracellular	64.81	63.71
CDY05907	Canola	cytosol	59.87	63.7
KRH40394	Soybean	extracellular, nucleus	65.88	63.43
KRH00832	Soybean	nucleus	65.88	63.43
KRH06594	Soybean	mitochondrion	66.74	63.34
AT3G48950.1	Thale cress	extracellular	63.73	63.33
PGSC0003DMT400024595	Potato	cytosol	64.38	62.89
CDY05885	Canola	extracellular	62.45	62.72
Bra018023.1-P	Field mustard	extracellular	63.09	62.69
KRH59960	Soybean	nucleus	64.59	61.18
CDY08113	Canola	extracellular	59.66	60.96
KRH41230	Soybean	nucleus	63.95	60.32
CDY08095	Canola	extracellular, plasma membrane	63.3	59.6
AT2G23900.1	Thale cress	extracellular	60.73	59.33
CDY20264	Canola	extracellular	60.52	59.0
CDY39678	Canola	extracellular	60.3	58.79
VIT_16s0050g01120.t01	Wine grape	cytosol	22.32	55.62
KRH55874	Soybean	cytosol	7.3	51.52
KRH69147	Soybean	nucleus	47.21	47.41
KRH68340	Soybean	nucleus	46.78	46.58
KRH33649	Soybean	nucleus	46.35	46.55
KRG96607	Soybean	extracellular	46.57	46.37
KRH14547	Soybean	extracellular	43.35	45.29
KRH45957	Soybean	extracellular	42.92	45.15
KRG99037	Soybean	nucleus	42.7	45.02
KRH69264	Soybean	extracellular	43.35	44.4
KRH50791	Soybean	extracellular	42.27	43.88
KRH02302	Soybean	extracellular	42.06	43.65
KRH31843	Soybean	extracellular	42.27	43.2
KRH37050	Soybean	extracellular, vacuole	41.85	43.14
KRH73576	Soybean	extracellular	25.54	43.12
KRH53903	Soybean	extracellular, plasma membrane, plastid	42.49	41.51
KRH12027	Soybean	extracellular, vacuole	41.85	41.4
KRG96478	Soybean	endoplasmic reticulum, extracellular	42.06	40.66
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	42.92	40.65
KRH19342	Soybean	endoplasmic reticulum	42.49	40.33
KRH12568	Soybean	plastid	41.42	39.47
KRH68221	Soybean	extracellular	42.06	39.44
KRH37525	Soybean	extracellular, plasma membrane	41.2	38.87
Bra032138.1-P	Field mustard	cytosol	60.52	35.25
VIT_16s0050g01110.t01	Wine grape	extracellular, golgi	66.09	29.31
KRH33610	Soybean	plastid	9.66	25.0
KRG95330	Soybean	extracellular, plasma membrane, vacuole	23.82	23.82

Protein Annotations

EntrezGene:100794916	Gene3D:2.160.20.10	MapMan:50.3.2	EMBL:ACUP02006660	EnsemblPlantsGene:GLYMA_10G230900	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	UniProt:I1LDL8	InterPro:IPR012334	EnsemblPlants:KRH35238	ProteinID:KRH35238	ProteinID:KRH35238.1
PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF17	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	TMHMM:TMhelix	UniParc:UPI000233C7BE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:46072235..46075548

Molecular Weight (calculated)

50756.9 Da

IEP (calculated)

6.836

GRAVY (calculated)

-0.013

Length

466 amino acids

Sequence
(BLAST)

001: MSQTMKMCPR LRNSYGIGVI SLVLILVSVN VKVASGVYYA INCRKHSAVL TDFGGVGDGI TSNTKAFQSA ISKLSQYASD GGAMLVVPPG KWLTGPFNLT
101: SHFTLFLDFG AVILASQDES EWPQLPVLPS YGRGRDAPGG RFSSLIFGTH LTDVVITGNN GLIDGQGAYW WNKFHQGQLT LTRPYLIEIM YSDQIQISFL
201: TLVNSPTWFV HPVYSSNIII KGLTIKAPVD SPNTDGINPD SCSNIRIEDC NITSGDDCIA VKSGWDEYGI RFGMPTQHLI IRRITCVSPD SAMIALGSEM
301: SGGIYDVRAE DLTAINTEAA VRIKTAIGRG GYVKNIFVKG MNLNTMKYVF WITGTYGDHP DPGYDPKALP YITGINYRDV VATNVTKSAR LEGISNDPFT
401: GICISNVSIQ VSEQQKKLQW NCSNISGVTS NVTPYPCALL PEKGQLECPF PTDTLPIDNV QLKSCN

Best Arabidopsis Sequence Match ( AT3G48950.1 )
(BLAST)

001: MIRPTFGLLV FLAIFLFPAI ESRSHRNSVT SKIEFSALNC RKHSAILTDF GAVGDGKTSN TKAFRNAISK LSQMATDGGA QLVVPPGKWL TGSFNLTSHF
101: TLFIQRGATI LASQDESEWP VIAPLPSYGK GRDGTGTGRF NSLISGTNLT DVVITGNNGT INGQGQYWWD KFKKKQFKIT RPYLIEILFS KNIQISNITL
201: IDSPSWNIHP VYCNSVIVKS VTVLAPVTVP NTDGINPDSC TNTLIEDCYI VSGDDCIAVK SGWDQYGIKF GMPTQQLSIR RLTCISPKSA GVALGSEMSG
301: GIKDVRIEDV TLTNTESAIR IKTAVGRGAY VKDIYARRIT MKTMKYVFWM SGNYGSHPDE GFDPKALPEI TNINYRDMTA ENVTMSASLD GIDKDPFTGI
401: CISNVTIALA AKAKKMQWNC TDVAGVTSRV TPEPCSLLPE KKAQAKNVDC AFPSDLIPIE SVVLKKCFL

Arabidopsis Description

Endo-polygalacturonase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SMT3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.