CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 2
plasma membrane 3
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37525	Soybean	extracellular, plasma membrane	96.52	95.55
KRH19342	Soybean	endoplasmic reticulum	79.55	79.23
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	78.32	77.85
VIT_11s0016g00720.t01	Wine grape	extracellular, peroxisome, plastid	75.46	74.85
Solyc07g042160.2.1	Tomato	nucleus	73.82	73.08
AT1G19170.1	Thale cress	cytosol, extracellular, mitochondrion, peroxisome	73.82	71.34
GSMUA_Achr3P10280_001	Banana	mitochondrion	68.92	70.35
GSMUA_Achr5P22120_001	Banana	extracellular	70.76	70.33
Solyc12g009210.1.1	Tomato	nucleus	71.17	70.3
PGSC0003DMT400007594	Potato	extracellular	71.17	70.3
CDX83782	Canola	extracellular, golgi, plastid	72.8	70.22
CDX96676	Canola	extracellular, golgi, plastid	72.8	70.22
GSMUA_Achr9P18190_001	Banana	mitochondrion	70.35	70.06
Bra016521.1-P	Field mustard	extracellular, golgi, plastid	72.6	70.02
KRH55874	Soybean	cytosol	9.2	68.18
Os02t0781000-01	Rice	extracellular	39.06	67.02
GSMUA_Achr11P...	Banana	mitochondrion	64.21	63.95
TraesCS6B01G371200.2	Wheat	mitochondrion	64.21	63.43
EES05901	Sorghum	extracellular, golgi	64.83	63.4
TraesCS6D01G320600.1	Wheat	mitochondrion	63.8	63.03
Zm00001d052103_P001	Maize	plasma membrane	63.8	63.03
TraesCS6A01G340000.1	Wheat	mitochondrion	63.6	62.83
GSMUA_Achr8P23620_001	Banana	extracellular, golgi, mitochondrion, plasma membrane	62.17	60.92
KRG99037	Soybean	nucleus	40.9	45.25
KRH45957	Soybean	extracellular	40.7	44.92
KRH73576	Soybean	extracellular	25.15	44.57
KRH14547	Soybean	extracellular	39.88	43.72
KRH33649	Soybean	nucleus	41.1	43.32
KRH69147	Soybean	nucleus	40.9	43.1
KRH68340	Soybean	nucleus	41.1	42.95
KRG96607	Soybean	extracellular	40.7	42.52
KRH35240	Soybean	extracellular	40.9	42.46
KRH35239	Soybean	extracellular, plasma membrane, plastid	41.1	41.88
KRH35238	Soybean	extracellular	39.47	41.42
KRH53903	Soybean	extracellular, plasma membrane, plastid	39.47	40.46
KRH41230	Soybean	nucleus	40.08	39.68
KRH00832	Soybean	nucleus	39.26	39.67
KRH59960	Soybean	nucleus	39.88	39.63
KRH48075	Soybean	extracellular	39.06	39.63
KRH08861	Soybean	extracellular	38.65	39.62
KRH38380	Soybean	extracellular	38.45	39.5
KRH40394	Soybean	extracellular, nucleus	38.65	39.05
KRG91587	Soybean	cytosol, extracellular, plastid	19.43	38.93
KRH06594	Soybean	mitochondrion	38.04	37.88
KRH50791	Soybean	extracellular	34.76	37.86
KRH69264	Soybean	extracellular	35.17	37.8
KRH31843	Soybean	extracellular	35.17	37.72
KRH02302	Soybean	extracellular	34.56	37.64
KRH48076	Soybean	extracellular	36.4	37.55
KRH37050	Soybean	extracellular, vacuole	34.36	37.17
KRH12027	Soybean	extracellular, vacuole	35.17	36.52
KRG96478	Soybean	endoplasmic reticulum, extracellular	35.79	36.31
KRH68221	Soybean	extracellular	35.99	35.41
KRG95330	Soybean	extracellular, plasma membrane, vacuole	23.31	24.46
KRH33610	Soybean	plastid	9.0	24.44

Protein Annotations

EntrezGene:100791187	Gene3D:2.160.20.10	MapMan:50.3.2	EMBL:ACUP02009343	EnsemblPlantsGene:GLYMA_15G179500	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	UniProt:I1MHH8	InterPro:IPR012334	EnsemblPlants:KRH12568	ProteinID:KRH12568	ProteinID:KRH12568.1
PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF21	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	UniParc:UPI000233B8F3	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:17219937..17225941

Molecular Weight (calculated)

54076.3 Da

IEP (calculated)

9.538

GRAVY (calculated)

-0.095

Length

489 amino acids

Sequence
(BLAST)

001: MVENTGQGGG IWFQLFHPKT APFASHKTLF VFLWVATLAS VLVWQRTTIS GFLVLGGVPV RTPPKLRPVV FCLTEFGGVG DGVTLNTEAF ERGVGAISKL
101: GDKGGGQLNV PPGRWLTAPF NLTSHMTLFL ARDAVILAVQ DEKYWPLMPA LPSYGYGREH PGPRYSSLIH GQNLVDVVIT GHNGTINGQG QTWWTKYRQK
201: LLNHTRGPLV QILWSSNIVI SNITLRDSPF WTLHPYDCKN VTVKKVTILA PVSHAPNTDG IDPDSCEDML IEDCYISVGD DAIAIKSGWD QYGITYGRPS
301: KNIVIRNLVV RSNVSAGISI GSEMSGGVSN VLVENILVWE SRRAMRIKTA PGRGGYVRQI TYKNLMLKNV RVGIVIKTDY NEHPGAGYDP RALPILRDIS
401: FMNIRGQGVR VPVRIQGSEQ IPVRNVTFQD MKVGITYKKK HIFQCAFVQG QAIGTIFPSP CDSFDRYNEQ GQLVKHAASQ NVTDIDYEI

Best Arabidopsis Sequence Match ( AT1G19170.1 )
(BLAST)

001: MVENLFPSRF QFHLQRLDPK RRLTSLLASH KTLFTFLWIT AFGSVFLWQR TAYIEGGSGT GPVGGKFTIF GKIKPIQPIP RLRPVVFDLK DFGGVGDGFT
101: LNTEAFERAV ISISKLGGSS GGGQLNVPPG RWLTAPFNLT SHMTLFLAED SEILGVEDEK YWPLMPPLPS YGYGRERPGP RYGSLIHGQN LKDIVITGHN
201: GTINGQGQSW WKKHQRRLLN YTRGPLVQIM WSSDIVIANI TMRDSPFWTL HPYDCKNVTI RNVTILAPVT GAPNTDGIDP DSCEDMVIED CYISTGDDAI
301: AIKSGWDQFG IAYGRPSTNI LIRNLVVRSV ISAGVSIGSE MSGGISNVTI ENLLIWNSRR GIRIKTAPGR GGYIRNITYK NLTLDNVRVG IVIKTDYNEH
401: ADDNYDRKAY PILSGFSFAG IHGQGVRVPV RIHGSEQIPV RNVTFRDMSV GLTYKKKHIF QCSFVKGRVF GSIFPRPCEN FDVYDEEGRL VKPAAESNVA
501: DIDYDI

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE17]
SUBAcon: [mitochondrion,peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.