Factsheet for Os02t0781000-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052103_P001	Maize	plasma membrane	87.72	50.51
TraesCS6B01G371200.2	Wheat	mitochondrion	87.02	50.1
TraesCS6D01G320600.1	Wheat	mitochondrion	86.67	49.9
TraesCS6A01G340000.1	Wheat	mitochondrion	86.67	49.9
EES05901	Sorghum	extracellular, golgi	87.37	49.8
CDY53228	Canola	extracellular	18.25	46.43
KRH19342	Soybean	endoplasmic reticulum	70.53	40.94
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	70.18	40.65
PGSC0003DMT400007594	Potato	extracellular	69.12	39.8
Solyc07g042160.2.1	Tomato	nucleus	68.77	39.68
Solyc12g009210.1.1	Tomato	nucleus	68.77	39.6
VIT_11s0016g00720.t01	Wine grape	extracellular, peroxisome, plastid	68.42	39.55
KRH37525	Soybean	extracellular, plasma membrane	68.07	39.27
KRH12568	Soybean	plastid	67.02	39.06
AT3G42950.1	Thale cress	extracellular, golgi	66.32	39.05
AT1G19170.1	Thale cress	cytosol, extracellular, mitochondrion, peroxisome	69.12	38.93
Bra016521.1-P	Field mustard	extracellular, golgi, plastid	68.42	38.46
CDX83782	Canola	extracellular, golgi, plastid	68.42	38.46
CDX96676	Canola	extracellular, golgi, plastid	68.07	38.26
CDY27797	Canola	extracellular, mitochondrion, plastid	66.67	37.92
Bra039462.1-P	Field mustard	extracellular, mitochondrion, plastid	66.32	37.65
CDY41934	Canola	extracellular, mitochondrion, plastid	66.32	37.65
Solyc03g117750.2.1	Tomato	extracellular, golgi	63.16	36.96
PGSC0003DMT400036866	Potato	extracellular, golgi	62.81	36.76
GSMUA_Achr11P...	Banana	mitochondrion	62.81	36.46
Os09t0439400-01	Rice	plastid	64.91	35.17
Os01t0618900-01	Rice	cytosol, extracellular	40.0	34.65
GSMUA_Achr8P23620_001	Banana	extracellular, golgi, mitochondrion, plasma membrane	60.0	34.27
Os07t0245200-01	Rice	plasma membrane	42.81	27.35
Os02t0256100-01	Rice	extracellular	41.4	26.64
Os03t0833800-01	Rice	extracellular	42.46	25.42
Os12t0554800-01	Rice	cytosol, extracellular	36.84	24.76
Os06t0106800-01	Rice	extracellular	41.75	24.54
Os05t0587000-01	Rice	extracellular	37.54	23.88
Os03t0124900-01	Rice	extracellular	38.25	23.8
Os08t0107300-00	Rice	extracellular, mitochondrion	39.3	23.24
Os11t0658800-01	Rice	extracellular	35.79	22.72
Os09t0487600-01	Rice	extracellular	24.21	15.1
KRH55874	Soybean	cytosol	0.35	1.52

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	ProteinID:BAF10222.2	ProteinID:BAS81219.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798
GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlantsGene:Os02g0781000	EnsemblPlants:Os02t0781000-01	PFAM:PF00295
PANTHER:PTHR31339	PANTHER:PTHR31339:SF21	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	UniProt:Q0DX16
SMART:SM00710	SUPFAM:SSF51126	UniParc:UPI0001B662B3	SEG:seg	:	:

Description

Pectin lyase fold/virulence factor domain containing protein. (Os02t0781000-01)

Coordinates

chr2:+:33097336..33098768

Molecular Weight (calculated)

31702.7 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.175

Length

285 amino acids

Sequence
(BLAST)

001: TRPPLLQLMW SKDIIVANIT LKNSPFWHFH PYDCTNITVS NVTILAPISS APNTDGIDPD SCQDVLIENC YISVGDDAIA VKSGWDQYGI AYGRPSRNIV
101: IRNVMARSLV SAGISIGSEM SGGIANVTVE DVRIWESRRG LRIKTAIGRG GYIRDISYRN ITFDNVRAGI VIKVDYNEHA DDGYDRDAFP DITNISFKEI
201: HGRGVRVPVR AHGSSDIPIK DISFQDMSIG ISYKKKHIFQ CSFIEGRVIG SVFPKPCENL DLYNEQGQLV KRAAMVNSTE VDYDI

Best Arabidopsis Sequence Match ( AT1G19170.1 )
(BLAST)

001: MVENLFPSRF QFHLQRLDPK RRLTSLLASH KTLFTFLWIT AFGSVFLWQR TAYIEGGSGT GPVGGKFTIF GKIKPIQPIP RLRPVVFDLK DFGGVGDGFT
101: LNTEAFERAV ISISKLGGSS GGGQLNVPPG RWLTAPFNLT SHMTLFLAED SEILGVEDEK YWPLMPPLPS YGYGRERPGP RYGSLIHGQN LKDIVITGHN
201: GTINGQGQSW WKKHQRRLLN YTRGPLVQIM WSSDIVIANI TMRDSPFWTL HPYDCKNVTI RNVTILAPVT GAPNTDGIDP DSCEDMVIED CYISTGDDAI
301: AIKSGWDQFG IAYGRPSTNI LIRNLVVRSV ISAGVSIGSE MSGGISNVTI ENLLIWNSRR GIRIKTAPGR GGYIRNITYK NLTLDNVRVG IVIKTDYNEH
401: ADDNYDRKAY PILSGFSFAG IHGQGVRVPV RIHGSEQIPV RNVTFRDMSV GLTYKKKHIF QCSFVKGRVF GSIFPRPCEN FDVYDEEGRL VKPAAESNVA
501: DIDYDI

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE17]
SUBAcon: [mitochondrion,peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.