Factsheet for Os05t0587000-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES20030	Sorghum	extracellular	85.04	86.79
Os01t0618900-01	Rice	cytosol, extracellular	60.94	82.98
Zm00001d009717_P001	Maize	extracellular	81.92	82.29
GSMUA_Achr4P08470_001	Banana	extracellular	66.74	72.75
GSMUA_Achr4P15650_001	Banana	extracellular, plasma membrane, vacuole	62.28	68.72
VIT_02s0025g01330.t01	Wine grape	extracellular	64.29	64.43
KRH45957	Soybean	extracellular	63.39	64.11
Os02t0256100-01	Rice	extracellular	62.72	63.43
KRH73576	Soybean	extracellular	39.06	63.41
KRG99037	Soybean	nucleus	62.5	63.35
PGSC0003DMT400031687	Potato	extracellular	62.5	62.64
KRH14547	Soybean	extracellular	61.83	62.11
CDY03516	Canola	extracellular, vacuole	61.38	61.94
Bra013734.1-P	Field mustard	extracellular, vacuole	61.38	61.94
CDY47619	Canola	extracellular, vacuole	61.16	61.71
AT4G23820.1	Thale cress	extracellular, vacuole	60.27	60.81
Solyc08g082170.2.1	Tomato	nucleus	62.95	60.39
CDY10970	Canola	extracellular, vacuole	60.27	59.87
Bra019264.1-P	Field mustard	extracellular, vacuole	59.82	59.42
CDX94222	Canola	extracellular	59.6	59.2
CDX67513	Canola	extracellular	57.81	57.94
Bra028511.1-P	Field mustard	extracellular	57.81	57.94
CDY13383	Canola	extracellular	57.14	57.53
AT5G41870.1	Thale cress	extracellular	57.59	57.46
Os07t0245200-01	Rice	plasma membrane	47.1	47.31
Os11t0658800-01	Rice	extracellular	46.21	46.1
Os03t0833800-01	Rice	extracellular	48.88	46.01
Os12t0554800-01	Rice	cytosol, extracellular	43.08	45.52
Os03t0124900-01	Rice	extracellular	46.43	45.41
Os08t0107300-00	Rice	extracellular, mitochondrion	48.66	45.23
Os06t0106800-01	Rice	extracellular	44.87	41.44
Os02t0781000-01	Rice	extracellular	23.88	37.54
Os09t0439400-01	Rice	plastid	43.3	36.88
Os09t0487600-01	Rice	extracellular	21.21	20.79

Protein Annotations

Gene3D:2.160.20.10	EntrezGene:4339762	MapMan:50.3.2	ProteinID:BAF18380.1	ProteinID:BAS95583.1	ProteinID:EAZ10399.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798
GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlantsGene:Os05g0587000	EnsemblPlants:Os05t0587000-01	PFAM:PF00295
PANTHER:PTHR31339	PANTHER:PTHR31339:SF37	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	UniProt:Q0DFJ3
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000E12614	RefSeq:XP_015640011.1
SEG:seg	:	:	:	:	:

Description

Pectin lyase fold/virulence factor domain containing protein. (Os05t0587000-01)

Coordinates

chr5:-:29240182..29242422

Molecular Weight (calculated)

47428.4 Da

IEP (calculated)

6.989

GRAVY (calculated)

0.064

Length

448 amino acids

Sequence
(BLAST)

001: MVASLRLSLA AAAAAALAVA VALLLPPLAA AQGETTCPAD VPPRGAWMSV ASFGGVGDGR ALNTAAFARA VARIERRRAR GGALLYVPAG VWLTGPFNLT
101: SHMTLFLARG AVIRATQDTS SWPLIDPLPS YGRGRELPGG RYMSLIHGDG LQDVFITGEN GTIDGQGSVW WDMWRKRTLP FTRPHLLELI SSTDVIISNV
201: VFQDSPFWNI HPVYCSNVVI TNVTVLAPHD SPNTDGIDPD SSSNVCIEDS YISTGDDLIS IKSGWDEYGI AFGRPSSGIT IRRITGSGPF AGFAVGSETS
301: GGVENVHVEH LNFFGMGVGI HVKTNSGRGG FIRNITVSEV TLNGARYGLR IAGDVGGHPD ASYDPSKLPV VDGVTIKNVW GQNIRQAGLV RGIRDSVFSR
401: ICLSNVKLYG GDSVGPWKCR AVSGGALDVQ PSPCAELTST SEMSFCTN

Best Arabidopsis Sequence Match ( AT4G23820.1 )
(BLAST)

001: MWRLSVSIFL FSCLFVSSSS LGDSEATCSG IVPLRYRYDK ISITDFGGVG DGRTVNTKAF RAAIYRIQHL KRRGGTLLYI PPGVYLTESF NLTSHMTLYL
101: AKGAVIRAVQ DTWNWPLIDP LPSYGRGREL PGGRYMSFIH GDGLRDVVIT GQNGTIDGQG EVWWNMWRSR TLKYTRPNLI EFKDSKEIII SNVIFQNSPF
201: WNIHPVYCSN VVIHHVTILA PQDSPNTDGI DPDSSYNVCI EDSYISTGDD LVAIKSGWDQ YGIAYGRPSS NITIRRITGS SPFAGIAIGS ETSGGIKNII
301: AEHITLSNMG VGVNIKTNIG RGGYIKNIKI SDVYVDTAKY GIKIAGDTGD HPDENYNPNA LPVVKGIHIK NVWGVNVRNA GSIQGLKGSP FTGICLSEIN
401: LHGSLNSYKT WKCSDVSGTS LKVSPWPCSE LRTTGGSNLC SSTF

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SUP5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.