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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47619 Canola extracellular, vacuole 98.65 98.65
AT4G23820.1 Thale cress extracellular, vacuole 90.32 90.32
CDX94222 Canola extracellular 90.54 89.14
CDY10970 Canola extracellular, vacuole 90.32 88.91
KRG99037 Soybean nucleus 73.42 73.76
KRH45957 Soybean extracellular 73.2 73.36
VIT_02s0025g01330.t01 Wine grape extracellular 72.97 72.48
GSMUA_Achr10P... Banana cytosol 64.86 69.9
PGSC0003DMT400031687 Potato extracellular 70.27 69.8
KRH14547 Soybean extracellular 70.05 69.73
GSMUA_Achr8P19900_001 Banana cytosol 64.64 69.16
GSMUA_Achr4P08470_001 Banana extracellular 62.61 67.64
KRH73576 Soybean extracellular 41.89 67.39
GSMUA_Achr6P14280_001 Banana cytosol 60.59 66.92
Solyc08g082170.2.1 Tomato nucleus 69.82 66.38
Os01t0618900-01 Rice cytosol, extracellular 48.42 65.35
CDX67513 Canola extracellular 65.32 64.88
CDY13383 Canola extracellular 64.64 64.49
GSMUA_Achr4P15650_001 Banana extracellular, plasma membrane, vacuole 58.56 64.04
Os02t0256100-01 Rice extracellular 62.16 62.3
EES20030 Sorghum extracellular 61.49 62.19
EES04867 Sorghum extracellular, plasma membrane 62.61 62.05
TraesCS3B01G253000.1 Wheat extracellular 62.39 61.56
Os05t0587000-01 Rice extracellular 61.94 61.38
Zm00001d053395_P001 Maize extracellular 61.71 60.75
TraesCS3D01G230000.1 Wheat extracellular 61.26 60.44
Zm00001d009717_P001 Maize extracellular 60.59 60.31
EES01085 Sorghum extracellular 59.46 59.06
Zm00001d011369_P001 Maize extracellular 55.63 55.51
CDY69951 Canola cytosol 15.54 54.76
HORVU3Hr1G054810.4 Barley extracellular 61.04 50.09
CDX75352 Canola extracellular 51.13 48.09
CDX68976 Canola extracellular 50.9 47.98
CDY46115 Canola extracellular 50.9 47.78
CDX72404 Canola extracellular 50.45 47.36
CDY25090 Canola extracellular, golgi 47.75 46.29
CDX67875 Canola extracellular, golgi 47.52 46.07
CDY08036 Canola cytosol, nucleus, vacuole 38.51 45.36
CDX95899 Canola extracellular 45.95 45.03
CDX92101 Canola extracellular, golgi 45.95 44.84
CDX74085 Canola cytoskeleton, cytosol, vacuole 38.29 44.74
CDX82390 Canola extracellular 45.05 44.54
CDY54633 Canola extracellular 44.82 44.42
CDY11403 Canola extracellular, plasma membrane 45.95 44.35
CDX76617 Canola extracellular, plasma membrane 45.5 43.91
CDY70893 Canola cytosol 35.14 43.58
CDY33922 Canola extracellular 43.47 43.47
CDY05885 Canola extracellular 45.27 43.32
CDY05907 Canola cytosol 42.34 42.92
CDY65355 Canola extracellular 44.82 42.16
CDY69255 Canola cytosol 35.59 42.02
CDY48913 Canola extracellular 44.14 41.61
CDY10897 Canola cytosol, extracellular, peroxisome 22.3 41.42
CDY08113 Canola extracellular 42.34 41.23
CDY53228 Canola extracellular 10.36 41.07
CDY56436 Canola extracellular, vacuole 43.47 40.72
CDY08095 Canola extracellular, plasma membrane 45.27 40.61
CDY05643 Canola extracellular, plasma membrane, plastid 43.47 40.38
CDY44105 Canola cytosol, nucleus, plasma membrane 40.99 40.27
CDY20264 Canola extracellular 43.24 40.17
CDY39678 Canola extracellular 43.02 39.96
CDY10898 Canola cytosol 4.5 39.22
CDY27797 Canola extracellular, mitochondrion, plastid 43.47 38.52
CDX86247 Canola plasma membrane, plastid 43.47 38.52
CDX83782 Canola extracellular, golgi, plastid 43.92 38.46
CDX96676 Canola extracellular, golgi, plastid 43.92 38.46
CDX71719 Canola mitochondrion 14.19 38.41
CDY41934 Canola extracellular, mitochondrion, plastid 43.24 38.25
CDY10899 Canola cytosol 4.95 22.92
CDY02392 Canola extracellular, plasma membrane, vacuole 24.32 22.59
CDY12962 Canola extracellular, plasma membrane, vacuole 23.87 22.18
CDY11375 Canola mitochondrion 22.97 20.12
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078EQR9EnsemblPlants:CDY03516ProteinID:CDY03516ProteinID:CDY03516.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00116200001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF3InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EADA9C:
Description
BnaC01g15660D
Coordinates
chrLK031943:+:992349..995403
Molecular Weight (calculated)
48525.7 Da
IEP (calculated)
8.270
GRAVY (calculated)
-0.118
Length
444 amino acids
Sequence
(BLAST)
001: MWRFSVLILL FSHLAVSSSS LGDSEATCSG IVSLPNRNDR ISITDFGGVG DGRTVNTKAF REAIYRIQHL KRRGGTLLYI PPGVFLTESF NLTSHMTLFL
101: AKGAVLKAVQ DTWNWPLIDP LPSYGRGREL PGARYMSFIH GDGLRDVVIT GENGTIDGQG EVWWNMWRSR TLKFTRPNLI ELKNSKEIII SNVVFQNSPF
201: WNIHPVYCSD VVIHHVTILA PQDSPNTDGI DPDSSSNVCI EDSYISTGDD LVAIKSGWDE YGIAFGRPSS NITIRRITGS TPFAGIAIGS ETSGGIKNIV
301: AEHISLSNMG VGVNIKTNIG RGGYIKNIKI SNVYVENARY GIKIAGDTGD HPDAYYNPNA LPVVKGIRIN NVWGVNVRNA GSIQGLKDSP FTGICLSEIN
401: IHGSLNTYRT WKCSDVIGTS LKVSPWPCSE LRTTGGSYSC SSTF
Best Arabidopsis Sequence Match ( AT4G23820.1 )
(BLAST)
001: MWRLSVSIFL FSCLFVSSSS LGDSEATCSG IVPLRYRYDK ISITDFGGVG DGRTVNTKAF RAAIYRIQHL KRRGGTLLYI PPGVYLTESF NLTSHMTLYL
101: AKGAVIRAVQ DTWNWPLIDP LPSYGRGREL PGGRYMSFIH GDGLRDVVIT GQNGTIDGQG EVWWNMWRSR TLKYTRPNLI EFKDSKEIII SNVIFQNSPF
201: WNIHPVYCSN VVIHHVTILA PQDSPNTDGI DPDSSYNVCI EDSYISTGDD LVAIKSGWDQ YGIAYGRPSS NITIRRITGS SPFAGIAIGS ETSGGIKNII
301: AEHITLSNMG VGVNIKTNIG RGGYIKNIKI SDVYVDTAKY GIKIAGDTGD HPDENYNPNA LPVVKGIHIK NVWGVNVRNA GSIQGLKGSP FTGICLSEIN
401: LHGSLNSYKT WKCSDVSGTS LKVSPWPCSE LRTTGGSNLC SSTF
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SUP5]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.