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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • mitochondrion 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007626.1-P Field mustard mitochondrion 93.29 81.41
CDX71719 Canola mitochondrion 20.91 64.63
CDY10897 Canola cytosol, extracellular, peroxisome 18.34 38.91
CDY53228 Canola extracellular 6.31 28.57
CDY69951 Canola cytosol 6.31 25.4
CDY70893 Canola cytosol 17.75 25.14
CDY25090 Canola extracellular, golgi 22.49 24.89
CDX67875 Canola extracellular, golgi 22.29 24.67
CDY69255 Canola cytosol 18.15 24.47
CDY11403 Canola extracellular, plasma membrane 21.89 24.13
CDX82390 Canola extracellular 20.91 23.61
CDY54633 Canola extracellular 20.71 23.44
CDX76617 Canola extracellular, plasma membrane 21.1 23.26
CDY44105 Canola cytosol, nucleus, plasma membrane 20.71 23.23
CDX92101 Canola extracellular, golgi 20.71 23.08
CDY08036 Canola cytosol, nucleus, vacuole 17.16 23.08
CDY03516 Canola extracellular, vacuole 20.12 22.97
CDX95899 Canola extracellular 20.51 22.96
CDY47619 Canola extracellular, vacuole 19.92 22.75
CDX74085 Canola cytoskeleton, cytosol, vacuole 16.96 22.63
CDX94222 Canola extracellular 19.92 22.39
CDY10970 Canola extracellular, vacuole 19.72 22.17
CDY33922 Canola extracellular 19.33 22.07
CDY65355 Canola extracellular 19.92 21.4
CDX67513 Canola extracellular 18.74 21.25
CDY13383 Canola extracellular 18.54 21.12
CDY48913 Canola extracellular 19.53 21.02
CDY56436 Canola extracellular, vacuole 19.53 20.89
CDY05643 Canola extracellular, plasma membrane, plastid 19.53 20.71
CDY05907 Canola cytosol 17.36 20.09
CDX68976 Canola extracellular 18.34 19.75
CDX75352 Canola extracellular 18.34 19.7
CDY46115 Canola extracellular 18.34 19.66
CDY05885 Canola extracellular 17.95 19.61
CDX86247 Canola plasma membrane, plastid 19.33 19.56
CDY08113 Canola extracellular 17.55 19.52
CDY20264 Canola extracellular 18.34 19.46
CDX72404 Canola extracellular 18.15 19.45
CDY39678 Canola extracellular 18.15 19.25
CDY08095 Canola extracellular, plasma membrane 18.74 19.19
CDX83782 Canola extracellular, golgi, plastid 18.34 18.34
CDX96676 Canola extracellular, golgi, plastid 18.34 18.34
CDY27797 Canola extracellular, mitochondrion, plastid 17.95 18.16
CDY41934 Canola extracellular, mitochondrion, plastid 17.95 18.13
CDY10898 Canola cytosol 1.38 13.73
CDY02392 Canola extracellular, plasma membrane, vacuole 10.85 11.51
CDY12962 Canola extracellular, plasma membrane, vacuole 10.85 11.51
CDY10899 Canola cytosol 1.38 7.29
Protein Annotations
Gene3D:2.160.20.10MapMan:35.1GO:A0A078FAE5UniProt:A0A078FAE5EnsemblPlants:CDY11375ProteinID:CDY11375
ProteinID:CDY11375.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00049428001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF9InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SUPFAM:SSF51126UniParc:UPI0004EDFC6DSEG:seg:::
Description
BnaA09g39410DBnaA09g39410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAE5]
Coordinates
chrLK032011:+:72580..77889
Molecular Weight (calculated)
58582.5 Da
IEP (calculated)
9.472
GRAVY (calculated)
-0.073
Length
507 amino acids
Sequence
(BLAST)
001: MILFGDISLL MRFRRALGVR LFSLREYHSP VLKFLVLWSY CIDGLYLHML QVDIIIQGSC LVQIRNRQKI PPWPGDFKRW MRLIHEELET WCIIIGLYFW
101: WFMSYRQLLL ILFILKAFLH DPVVLMIKNK IQRSEWGSVR FKARSLKISQ QQNGLKLLLY WSQSKRISTP WTECISLPSY GRGRELPGKR HRSLLYGQIL
201: TDVVITGDNG TIDGQGSKWW DWFRNGELNY TRPHLVELMN STGLIISNLT FLNSPFWNIN PSIEVEERVD ECSVDDLLSF ISGRLVLRFS CINVFFPHNM
301: FSFVGQGVNC GIINNPWAQS RLSTLYAYSP FIGYVLSLEC VSKNKTMKKH DPYRFYNGLL AAQGFSQSPE AAEVLFREMV WLRLAPTKVT FLAESSRQRD
401: KFRVFVVKIY AADVENLEEK LETLVMEHES LEEYNEPKNK TKKKKIDTHG LYNALLSAHG YSESPEAAEV LLKGMVGCGF APTDITFRVM MKALGNSGKS
501: GLAPGYK
Best Arabidopsis Sequence Match ( AT3G62110.1 )
(BLAST)
001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W
Arabidopsis Description
AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.