Factsheet for Bra007626.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11375	Canola	mitochondrion	81.41	93.29
Bra003485.1-P	Field mustard	extracellular, golgi	20.83	26.42
Bra007662.1-P	Field mustard	extracellular, plasma membrane	20.14	25.43
Bra001642.1-P	Field mustard	vacuole	19.45	25.06
Bra022182.1-P	Field mustard	extracellular, golgi	19.28	24.72
Bra013734.1-P	Field mustard	extracellular, vacuole	18.24	23.87
Bra019299.1-P	Field mustard	extracellular, plasma membrane	19.79	23.33
Bra013697.1-P	Field mustard	extracellular, plasma membrane	19.62	23.12
Bra037429.1-P	Field mustard	extracellular	17.56	22.97
Bra019264.1-P	Field mustard	extracellular, vacuole	17.73	22.84
Bra007609.1-P	Field mustard	extracellular	18.24	22.55
Bra028511.1-P	Field mustard	extracellular	17.21	22.37
Bra001215.1-P	Field mustard	extracellular	17.21	22.27
Bra018023.1-P	Field mustard	extracellular	17.56	21.75
Bra020656.1-P	Field mustard	extracellular, plasma membrane	17.56	21.7
Bra018004.1-P	Field mustard	cytosol	15.66	20.82
Bra011440.1-P	Field mustard	extracellular	16.7	20.46
Bra037005.1-P	Field mustard	extracellular	16.7	20.34
Bra016521.1-P	Field mustard	extracellular, golgi, plastid	17.04	19.53
Bra039462.1-P	Field mustard	extracellular, mitochondrion, plastid	16.7	19.32
Bra032138.1-P	Field mustard	cytosol	16.52	12.0
Bra035299.1-P	Field mustard	extracellular, plasma membrane, vacuole	9.47	11.51

Protein Annotations

Gene3D:2.160.20.10	MapMan:35.1	EnsemblPlantsGene:Bra007626	EnsemblPlants:Bra007626.1	EnsemblPlants:Bra007626.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_28	InterPro:IPR012334	UniProt:M4CTT2	PFAM:PF00295
PANTHER:PTHR31339	PANTHER:PTHR31339:SF9	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SUPFAM:SSF51126	UniParc:UPI0002542A38
SEG:seg	:	:	:	:	:

Description

AT3G62110 (E=8e-044) | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein

Coordinates

chrA09:+:30100900..30105661

Molecular Weight (calculated)

67299.8 Da

IEP (calculated)

8.847

GRAVY (calculated)

-0.180

Length

581 amino acids

Sequence
(BLAST)

001: MILFGDISLL MRFRRALGVR LFSLREYHSP VLEFLVLWSY CIDGLYLHML QVDIIIQGSC LVQIRNRQKI PPWPGDFKRW MRLIHEELET WCIIIGLYFW
101: WFMSYRQLLL ILFILKAFLQ DSVVLMIKNK IQRSEWGSVR FKAWSLKISQ QQNGLKLLLY WSQSKRISTP WTECVSLPSY GRGRELPGKR HRSLLYGQIL
201: TDVVITGDNG TIDGQGSKWW DWFRNGELNY TRPHLVELMN STGLIISNLT FLNSPFWNIN PSIEVEERVD ECSVDDLLSF ISGEQIGLIT ERFVKGEFKE
301: GSTPLSQAVS LRDQFRVLVV KTCGDVENLN PRWESLEERL ETLVMEYEHW NDYKKTKTTL ANLCLSKHFD IREVKMIHAL GVKCDIINNP WAQSRLSTLY
401: AYSPFIGYVL SLECVSRNKT MKKHNPYRFY NGLLAAQGFS QSPEAAEVLL REMVQLRLAP TKVTFLAESS RQRDKFRVFV VKVYAADVEN LEERLETLVM
501: EHESLEEYNE PKNKTKKKKI DTHRLYNALL SANGYSESPE AAEVLLKGMV GCGFAPTDIT FRVMMKALGN SGKSGLAPGY K

Best Arabidopsis Sequence Match ( AT3G62110.1 )
(BLAST)

001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W

Arabidopsis Description

AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.