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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022182.1-P Field mustard extracellular, golgi 98.02 98.45
CDX95899 Canola extracellular 96.04 96.47
CDY54633 Canola extracellular 87.25 88.62
CDX82390 Canola extracellular 87.25 88.42
AT3G16850.1 Thale cress vacuole 86.37 86.37
CDY33922 Canola extracellular 59.56 61.04
CDX74085 Canola cytoskeleton, cytosol, vacuole 50.77 60.79
CDY08036 Canola cytosol, nucleus, vacuole 50.11 60.48
VIT_05s0077g01760.t01 Wine grape extracellular, vacuole 60.44 60.44
KRH37050 Soybean extracellular, vacuole 59.34 59.73
KRH50791 Soybean extracellular 57.8 58.57
KRH02302 Soybean extracellular 57.58 58.35
CDY56436 Canola extracellular, vacuole 60.44 58.02
PGSC0003DMT400018848 Potato extracellular 58.02 57.77
KRH12027 Soybean extracellular, vacuole 59.56 57.54
GSMUA_Achr5P00100_001 Banana cytosol, extracellular, plastid 53.19 57.35
Solyc06g009790.2.1 Tomato extracellular 57.58 57.33
PGSC0003DMT400081328 Potato extracellular 57.8 57.3
CDY05643 Canola extracellular, plasma membrane, plastid 60.0 57.11
Os12t0554800-01 Rice cytosol, extracellular 52.75 56.6
Solyc09g075460.2.1 Tomato extracellular 57.8 54.79
Zm00001d023813_P001 Maize extracellular, vacuole 55.38 54.66
TraesCS5B01G097100.2 Wheat extracellular 53.85 54.57
TraesCS5D01G102900.1 Wheat unclear 53.41 54.12
Os11t0658800-01 Rice extracellular 53.41 54.12
CDX86247 Canola plasma membrane, plastid 59.34 53.89
KXG29050 Sorghum extracellular 53.41 53.88
TraesCS4D01G146700.1 Wheat extracellular, golgi, vacuole 53.41 53.17
TraesCS4B01G144700.2 Wheat extracellular, golgi, vacuole 52.75 52.52
TraesCS4A01G168800.1 Wheat extracellular, golgi, vacuole 52.31 52.08
VIT_05s0077g01740.t01 Wine grape nucleus 26.81 51.69
TraesCS5A01G090800.2 Wheat extracellular, golgi, mitochondrion, plastid 53.41 51.27
CDY69951 Canola cytosol 14.07 50.79
GSMUA_Achr11P... Banana extracellular, vacuole 48.35 49.44
Zm00001d048696_P001 Maize extracellular 52.09 47.98
HORVU5Hr1G023800.7 Barley plastid 53.85 47.76
CDX67875 Canola extracellular, golgi 47.91 47.6
CDY25090 Canola extracellular, golgi 47.69 47.38
CDY11403 Canola extracellular, plasma membrane 46.81 46.3
CDY03516 Canola extracellular, vacuole 44.84 45.95
CDY47619 Canola extracellular, vacuole 44.84 45.95
CDX94222 Canola extracellular 45.27 45.68
CDX76617 Canola extracellular, plasma membrane 46.15 45.65
CDY13383 Canola extracellular 44.62 45.62
CDY10970 Canola extracellular, vacuole 45.05 45.45
CDX67513 Canola extracellular 44.62 45.41
GSMUA_Achr11P... Banana extracellular 53.41 44.26
CDX75352 Canola extracellular 45.27 43.64
CDX68976 Canola extracellular 44.84 43.31
CDY46115 Canola extracellular 44.62 42.92
CDX72404 Canola extracellular 43.96 42.28
CDX71719 Canola mitochondrion 15.16 42.07
CDY05885 Canola extracellular 42.42 41.59
CDY65355 Canola extracellular 42.64 41.1
CDY05907 Canola cytosol 39.34 40.87
CDY48913 Canola extracellular 41.98 40.55
CDY70893 Canola cytosol 31.43 39.94
CDY20264 Canola extracellular 41.76 39.75
CDY10897 Canola cytosol, extracellular, peroxisome 20.88 39.75
CDY39678 Canola extracellular 41.54 39.54
CDY08113 Canola extracellular 39.34 39.25
CDY08095 Canola extracellular, plasma membrane 42.42 38.99
CDY44105 Canola cytosol, nucleus, plasma membrane 38.46 38.72
CDY69255 Canola cytosol 31.87 38.56
GSMUA_Achr11P... Banana cytosol 53.19 36.56
CDX83782 Canola extracellular, golgi, plastid 40.0 35.9
CDX96676 Canola extracellular, golgi, plastid 39.78 35.7
CDY27797 Canola extracellular, mitochondrion, plastid 38.9 35.33
CDY41934 Canola extracellular, mitochondrion, plastid 38.9 35.26
CDY10898 Canola cytosol 3.74 33.33
CDY53228 Canola extracellular 7.91 32.14
CDY10899 Canola cytosol 4.4 20.83
CDY02392 Canola extracellular, plasma membrane, vacuole 21.76 20.71
CDY12962 Canola extracellular, plasma membrane, vacuole 21.76 20.71
CDY11375 Canola mitochondrion 23.08 20.71
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078DS57EnsemblPlants:CDX92101ProteinID:CDX92101ProteinID:CDX92101.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00153789001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF15InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EDD943:
Description
BnaA05g23060D
Coordinates
chrLK031871:+:199363..202738
Molecular Weight (calculated)
49257.3 Da
IEP (calculated)
6.145
GRAVY (calculated)
-0.033
Length
455 amino acids
Sequence
(BLAST)
001: MKMPVALVWL LAFTNLLFIK VESNNAVCKK TFKLDPRPHS VSILEFGAVG DGKSLNTIAF QNAIFYLKSF ADKGGAQLYV PPGKWLTGSF NLTSHLTLFL
101: EKGATILASP DPSHWDIVSP LPSYGRGIEL PGKRYRSLIN GDNLQDVVIT GDNGTFDGQG AAWWEWLESG TLNYSRPHII EFVSSKNILI SNLTFLNAPS
201: VNIHPVYCSH VHIKKVLIET SVDSPYVLGV VPDSSDNVCI EDSTINVGHD TVSLKSGWDQ YGINYGRPTT TVHIRNLVLK SPTGAGISFG SEMSGGISDV
301: TVEHLTIHSS RVGVAFRTTR GRGGYIRNIT ISGVVLSGVD TAIVADGHTG AHADDKYDRD ALPVVTRIVL RNFTGDGIGL AGNFTGIEES PFTSICLKDI
401: HLQTSSESWV CSNVSGYAED VSPEPCEELM SSPSACFAGG RIYGGETARE SYYSW
Best Arabidopsis Sequence Match ( AT3G16850.1 )
(BLAST)
001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.