Factsheet for HORVU5Hr1G023800.7

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G102900.1	Wheat	unclear	82.46	94.21
TraesCS5B01G097100.2	Wheat	extracellular	81.09	92.65
TraesCS5A01G090800.2	Wheat	extracellular, golgi, mitochondrion, plastid	83.82	90.72
Os12t0554800-01	Rice	cytosol, extracellular	69.2	83.73
Zm00001d023813_P001	Maize	extracellular, vacuole	67.45	75.05
GSMUA_Achr5P00100_001	Banana	cytosol, extracellular, plastid	55.95	68.01
GSMUA_Achr11P...	Banana	extracellular, vacuole	51.46	59.33
VIT_05s0077g01760.t01	Wine grape	extracellular, vacuole	52.05	58.68
KRH37050	Soybean	extracellular, vacuole	50.88	57.74
PGSC0003DMT400018848	Potato	extracellular	50.68	56.89
KRH02302	Soybean	extracellular	49.71	56.79
VIT_07s0005g00890.t01	Wine grape	extracellular	52.63	56.6
Solyc06g009790.2.1	Tomato	extracellular	50.29	56.46
KRH50791	Soybean	extracellular	49.32	56.35
CDX74085	Canola	cytoskeleton, cytosol, vacuole	41.52	56.05
PGSC0003DMT400081328	Potato	extracellular	50.1	55.99
KRH31843	Soybean	extracellular	49.51	55.7
CDY33922	Canola	extracellular	48.15	55.63
KRH12027	Soybean	extracellular, vacuole	51.07	55.63
KRH69264	Soybean	extracellular	49.32	55.6
CDY08036	Canola	cytosol, nucleus, vacuole	40.74	55.44
AT3G16850.1	Thale cress	vacuole	48.93	55.16
Bra037429.1-P	Field mustard	extracellular	47.56	54.95
VIT_05s0077g01740.t01	Wine grape	nucleus	25.15	54.66
AT5G49215.1	Thale cress	extracellular, vacuole	47.76	54.57
KRG96478	Soybean	endoplasmic reticulum, extracellular	50.88	54.15
Solyc09g075460.2.1	Tomato	extracellular	50.49	53.96
GSMUA_Achr11P...	Banana	extracellular	57.7	53.92
Bra022182.1-P	Field mustard	extracellular, golgi	47.56	53.86
CDX95899	Canola	extracellular	47.56	53.86
CDX92101	Canola	extracellular, golgi	47.76	53.85
CDY54633	Canola	extracellular	46.59	53.35
AT3G06770.5	Thale cress	extracellular	46.39	53.24
Bra001215.1-P	Field mustard	extracellular	46.59	53.23
KRH68221	Soybean	extracellular	51.46	53.12
CDX82390	Canola	extracellular	46.39	53.01
Bra001642.1-P	Field mustard	vacuole	46.59	52.99
Bra020656.1-P	Field mustard	extracellular, plasma membrane	48.15	52.55
CDY56436	Canola	extracellular, vacuole	48.15	52.11
CDY05643	Canola	extracellular, plasma membrane, plastid	47.76	51.26
HORVU5Hr1G117470.3	Barley	extracellular	46.0	49.58
CDX86247	Canola	plasma membrane, plastid	47.76	48.9
GSMUA_Achr11P...	Banana	cytosol	57.7	44.71
HORVU3Hr1G054810.4	Barley	extracellular	36.65	34.75
HORVU5Hr1G062220.2	Barley	extracellular	34.31	33.15
HORVU7Hr1G077560.12	Barley	plastid	30.21	32.09
HORVU3Hr1G088950.1	Barley	extracellular	18.91	21.37
HORVU5Hr1G073070.1	Barley	extracellular, plasma membrane, vacuole	18.71	20.69

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A287QNB8	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU5Hr1G023800
EnsemblPlants:HORVU5Hr1G023800.7	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF11	InterPro:PbH1
InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	UniParc:UPI000B48469A	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:126602486..126606241

Molecular Weight (calculated)

54605.5 Da

IEP (calculated)

6.689

GRAVY (calculated)

-0.009

Length

513 amino acids

Sequence
(BLAST)

001: ASSSLSPPPP SPSPSSSLSV RSQLLSSLPS SSAPAVRRAT SSRPLPSGSP RRSPPFCRKG GGTLMARLVV LASLLAVIGL AKGEAQCLRY SGRPRPHSVT
101: ITEFGAVGDG LTLNTVPFQN AIFYLRSFAD KGGAQLYVPK GRWLTGSFNL TSHLTLFLEK DAVIIGIKDV TQWPIVEPLP SYGQGIDLPG ARHRSLINGH
201: NVTDVIITGN NGIVDGQGLI WWNWFRSNKL NYSRPHLVEF EDSEEIVISN LTFLNSPAWG IHPVYCSNVT IHNITIETAL DAPLTNGIVP DSCSNMCIEN
301: SRISVGHDAI SLKSGWDKYG ITFGRPTSDI HISRVDLQAS LGAALAFGSE MSGGISDVHV DQLHIHGSAK GISFRTAPGR GGYIRDAIVS DVQMENIHVA
401: IEFTGDWSSH PGDHFDPSAL PVISGITLKD MVGTNISVAG VLSGIDGDPF TNICLSNINF TIADSAHSAS WSCSNISGYS ESVFPEPCSD LHSQSSNSSI
501: CSSAFSYHAL ATA

Best Arabidopsis Sequence Match ( AT3G16850.1 )
(BLAST)

001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.