Factsheet for HORVU5Hr1G062220.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G219200.1	Wheat	plastid	86.82	86.82
TraesCS5A01G212900.1	Wheat	plastid	86.44	86.44
TraesCS5B01G210900.1	Wheat	plastid	86.44	86.44
EER96790	Sorghum	plastid	78.91	80.89
Zm00001d020615_P001	Maize	plastid	77.97	80.23
Os09t0439400-01	Rice	plastid	78.53	79.28
PGSC0003DMT400041391	Potato	cytosol	22.03	70.48
HORVU5Hr1G117470.3	Barley	extracellular	35.22	39.29
HORVU3Hr1G054810.4	Barley	extracellular	38.79	38.08
HORVU7Hr1G077560.12	Barley	plastid	32.58	35.82
HORVU5Hr1G023800.7	Barley	plastid	33.15	34.31
VIT_13s0139g00110.t01	Wine grape	cytosol	6.03	33.33
HORVU3Hr1G088950.1	Barley	extracellular	20.53	24.01
HORVU5Hr1G073070.1	Barley	extracellular, plasma membrane, vacuole	20.53	23.49

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A287RH08	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU5Hr1G062220	EnsemblPlants:HORVU5Hr1G062220.2	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31339
PANTHER:PTHR31339:SF21	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126
TMHMM:TMhelix	UniParc:UPI000B46D41E	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:484372409..484375450

Molecular Weight (calculated)

52184.8 Da

IEP (calculated)

9.684

GRAVY (calculated)

-0.118

Length

531 amino acids

Sequence
(BLAST)

001: RSRPXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XYRAYLVALW LVGFVLVFLW QNTSMGRLRL YNRPPMPKRA
101: PSAAAMGQWV ASPPVYDLRE FGGVGDGRTL NTAAFEGAVA AISERGGGRL TVPAGRWLTA PFNLTSHXXX FLAAGAEILG VQDERYWPLM SPLPSYGYGR
201: EHKGPRYGSL IHGQDLKDVI ITGHNGTING QGQSWWIKFR KKLLNHTRGP LVQLMRSSNI IISNITLRDS PFWTLHVYDC KNVTISGTTI LAPIVGAPNT
301: DGIDPDSCEN VMIENCYISV GDDGVAIKSG WDQYGIAYGR PSTNITIRNV IIRSMVSAGV SIGSEMSGGV SNVLVENVHI WSSRRGVRIK TAPGRGAYVN
401: NIVYRNITLE NVRVGIVIKT DYNEHPDELF DPKAVPVVGN ISYTSIHGQR VRVPVRIQGS AEIPVRNVTF HDMSVGILDK KHHVFQCSFV QGQVIGYVFP
501: VPCKNLDLYN ERREMVKQST LQNISDIDYS F

Best Arabidopsis Sequence Match ( AT3G42950.1 )
(BLAST)

001: MVRRFLSSHK SLITVFWIAT FASLFIWQFG GVSTNLYSGF SLFWSSSSTT TTVFSGGFPK LRPVVFNLTD FGAVGDGVTI NTEAFEKAIY KISKLAKKGG
101: GQLNVPPGRW LTAPFNLTSY MTLFLSENAE ILALQDEKYW SLLPPLPSYG YGREHHGPRY GSFIHGQNLR DVVVTGNNGS INGQGQTWWK KYRQKLLNHT
201: RGPLVQIMWS SDIVFANITL RDSPFWTLHP YDCKNVTITN MTILAPVFEA PNTDGIDPDS CEDMLIENSY ISVGDDGIAI KSGWDQYGTT YGKPSKNILI
301: RNLIIRSMVS AGISIGSEMS GGVSNITVEN ILIWSSRRGV RIKTAPGRGG YVRDITFRNV TLDELRVGIV IKTDYNEHPD GGFNPQAFPI LENINYTGIY
401: GQGVRVPVRI QGSKEIPVKN VTFRDMSVGI TYKKKHIFQC AYVEGRVIGT IFPAPCDNLD RYDEQERLVK QSDSQNATDI DYEI

Arabidopsis Description

AT3g42950/F18P9_110 [Source:UniProtKB/TrEMBL;Acc:Q9M1L0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.