Factsheet for Os09t0439400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 2
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96790	Sorghum	plastid	83.65	84.94
Zm00001d020615_P001	Maize	plastid	82.7	84.3
TraesCS5D01G219200.1	Wheat	plastid	83.84	83.05
TraesCS5A01G212900.1	Wheat	plastid	83.65	82.86
TraesCS5B01G210900.1	Wheat	plastid	83.27	82.49
HORVU5Hr1G062220.2	Barley	extracellular	79.28	78.53
PGSC0003DMT400041391	Potato	cytosol	22.05	69.88
Os02t0781000-01	Rice	extracellular	35.17	64.91
Os02t0256100-01	Rice	extracellular	37.83	44.92
Os01t0618900-01	Rice	cytosol, extracellular	27.95	44.68
Os05t0587000-01	Rice	extracellular	36.88	43.3
Os03t0124900-01	Rice	extracellular	37.45	43.01
Os08t0107300-00	Rice	extracellular, mitochondrion	37.64	41.08
Os03t0833800-01	Rice	extracellular	36.5	40.34
Os12t0554800-01	Rice	cytosol, extracellular	32.51	40.33
Os06t0106800-01	Rice	extracellular	37.07	40.21
Os07t0245200-01	Rice	plasma membrane	34.03	40.13
Os11t0658800-01	Rice	extracellular	32.51	38.08
VIT_13s0139g00110.t01	Wine grape	cytosol	6.08	33.33
Os09t0487600-01	Rice	extracellular	23.19	26.7

Protein Annotations

Gene3D:2.160.20.10	EntrezGene:4347165	MapMan:50.3.2	EMBL:AK121407	ProteinID:BAD36084.1	ProteinID:BAD36142.1
ProteinID:BAF25188.1	ProteinID:BAT08275.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575
GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28
InterPro:IPR012334	EnsemblPlantsGene:Os09g0439400	EnsemblPlants:Os09t0439400-01	PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF21
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	UniProt:Q69P92	SMART:SM00710	SUPFAM:SSF51126
TMHMM:TMhelix	UniParc:UPI0000403991	RefSeq:XP_015612358.1	SEG:seg	:	:

Description

Pectin lyase fold/virulence factor domain containing protein. (Os09t0439400-01)

Coordinates

chr9:+:16282843..16287189

Molecular Weight (calculated)

57111.2 Da

IEP (calculated)

9.708

GRAVY (calculated)

-0.112

Length

526 amino acids

Sequence
(BLAST)

001: MGETGVAVAS SPRAAASSPR AAASSASVAS SPRAGGVGGR HHHRRWGGAA AISPSYRAVL LALWLVGFAL VFLWQSTSVG RARLYTRPPL LPKRAPSAQG
101: MGQWVAAPPV YDLREFGGVG DGRTLNTEAF VAAVASIAER GGGRLVVPAG RWLTAPFNLT SRMTLFLAAG AEILGVQDER YWPLMSPLPS YGYGREHRGP
201: RYGSLIHGQD LKDVTITGQN GTINGQGQSW WSKFRKKVLN HTRGPLVQLM RSSNITISNI TLRDSPFWTL HIYDCKDVTI SDTTILAPIV GAPNTDGIDP
301: DSCENVVIKN CYISVGDDGI AIKSGWDQYG IAYGRPSTNI IIHNVTIRSM VSAGVSIGSE MSGGVSNVLV ENVHIWDSRR GVRIKTAPGR GAYVSNITYR
401: NITLEHIRVG IVIKTDYNEH PDEGFDPKAV PIIENISYSS IHGHGVRVPV RIQGSAEIPV KNVTFHDMSV GLVDRKNHVF QCSFVQGQVI GYVFPVPCKN
501: LDLYNERREL VKQSALQNIS DIDYSF

Best Arabidopsis Sequence Match ( AT3G42950.1 )
(BLAST)

001: MVRRFLSSHK SLITVFWIAT FASLFIWQFG GVSTNLYSGF SLFWSSSSTT TTVFSGGFPK LRPVVFNLTD FGAVGDGVTI NTEAFEKAIY KISKLAKKGG
101: GQLNVPPGRW LTAPFNLTSY MTLFLSENAE ILALQDEKYW SLLPPLPSYG YGREHHGPRY GSFIHGQNLR DVVVTGNNGS INGQGQTWWK KYRQKLLNHT
201: RGPLVQIMWS SDIVFANITL RDSPFWTLHP YDCKNVTITN MTILAPVFEA PNTDGIDPDS CEDMLIENSY ISVGDDGIAI KSGWDQYGTT YGKPSKNILI
301: RNLIIRSMVS AGISIGSEMS GGVSNITVEN ILIWSSRRGV RIKTAPGRGG YVRDITFRNV TLDELRVGIV IKTDYNEHPD GGFNPQAFPI LENINYTGIY
401: GQGVRVPVRI QGSKEIPVKN VTFRDMSVGI TYKKKHIFQC AYVEGRVIGT IFPAPCDNLD RYDEQERLVK QSDSQNATDI DYEI

Arabidopsis Description

AT3g42950/F18P9_110 [Source:UniProtKB/TrEMBL;Acc:Q9M1L0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.