Factsheet for Os02t0256100-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04867	Sorghum	extracellular, plasma membrane	82.39	81.47
Zm00001d053395_P001	Maize	extracellular	82.17	80.71
Os01t0618900-01	Rice	cytosol, extracellular	49.66	66.87
KRG99037	Soybean	nucleus	64.79	64.93
KRH45957	Soybean	extracellular	64.33	64.33
PGSC0003DMT400031687	Potato	extracellular	64.56	63.98
VIT_02s0025g01330.t01	Wine grape	extracellular	64.11	63.53
Os05t0587000-01	Rice	extracellular	63.43	62.72
Bra013734.1-P	Field mustard	extracellular, vacuole	62.53	62.39
CDY47619	Canola	extracellular, vacuole	62.53	62.39
CDY10970	Canola	extracellular, vacuole	63.43	62.31
CDX94222	Canola	extracellular	63.43	62.31
Bra019264.1-P	Field mustard	extracellular, vacuole	63.43	62.31
CDY03516	Canola	extracellular, vacuole	62.3	62.16
AT4G23820.1	Thale cress	extracellular, vacuole	62.3	62.16
KRH14547	Soybean	extracellular	62.3	61.88
Solyc08g082170.2.1	Tomato	nucleus	64.56	61.24
KRH73576	Soybean	extracellular	38.15	61.23
AT5G41870.1	Thale cress	extracellular	58.24	57.46
Bra028511.1-P	Field mustard	extracellular	57.79	57.27
CDX67513	Canola	extracellular	57.79	57.27
CDY13383	Canola	extracellular	57.34	57.08
Os12t0554800-01	Rice	cytosol, extracellular	43.34	45.28
Os11t0658800-01	Rice	extracellular	44.47	43.88
Os08t0107300-00	Rice	extracellular, mitochondrion	47.63	43.78
Os07t0245200-01	Rice	plasma membrane	43.12	42.83
Os03t0833800-01	Rice	extracellular	45.37	42.23
Os03t0124900-01	Rice	extracellular	43.12	41.7
Os02t0781000-01	Rice	extracellular	26.64	41.4
Os06t0106800-01	Rice	extracellular	44.7	40.82
Os09t0439400-01	Rice	plastid	44.92	37.83
Os09t0487600-01	Rice	extracellular	23.02	22.32

Protein Annotations

Gene3D:2.160.20.10	EntrezGene:4328920	MapMan:50.3.2	EMBL:AK059595	EMBL:AK061146	ProteinID:BAD27952.1
ProteinID:BAD29699.1	ProteinID:BAF08382.1	ProteinID:BAS77954.1	ProteinID:EEE56682.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28
InterPro:IPR012334	EnsemblPlantsGene:Os02g0256100	EnsemblPlants:Os02t0256100-01	PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF3
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	UniProt:Q6EN36	SMART:SM00710	SUPFAM:SSF51126
SignalP:SignalP-noTM	UniParc:UPI00003CE575	RefSeq:XP_015623208.1	SEG:seg	:	:

Description

Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-01);Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-02);Pectin lyase fold/virulence factor domain containing protein. (Os02t0256100-03)

Coordinates

chr2:+:8834369..8837492

Molecular Weight (calculated)

47918.0 Da

IEP (calculated)

7.807

GRAVY (calculated)

-0.084

Length

443 amino acids

Sequence
(BLAST)

001: MAALHGHGFA VTVLLVVLLV QCDAAEATTC AGAVPARPRP ETVSIAEFGG VGDGRTVNTW AFHKAVYRIQ HQRRRGGTTL LVPAGTWLTG SFNLTSHMTL
101: FLARGAVLKA TQETRSWPLA EPLPSYGRGR ELPGARYTSF IHGDGLRDIV ITGDKGIIDG QGDVWWNMWR QRTLQHTRPN LLEFMHSSGI HISNIVLKNS
201: PFWNIHPVYC DNVVITNMMI IAPHDSPNTD GVDPDSSTNV CIEDSYISTG DDLVAIKSGW DEYGIAYGRP SSGITIRRVR GSSPFSGIAI GSEASGGVSN
301: VLVEDCSIFN SGYGIHIKTN IGRGGFIRNI TVDNVRMNSV RNGLRIAGDV GDHPDEHFSQ LALPTVDAVS IKNVWGVNVQ QPGSIEGIRN SPFTRICLAN
401: VKLFGWRNNA AWKCRDVHGA ALGVQPGPCA ELTTSLSSGF CSY

Best Arabidopsis Sequence Match ( AT4G23820.1 )
(BLAST)

001: MWRLSVSIFL FSCLFVSSSS LGDSEATCSG IVPLRYRYDK ISITDFGGVG DGRTVNTKAF RAAIYRIQHL KRRGGTLLYI PPGVYLTESF NLTSHMTLYL
101: AKGAVIRAVQ DTWNWPLIDP LPSYGRGREL PGGRYMSFIH GDGLRDVVIT GQNGTIDGQG EVWWNMWRSR TLKYTRPNLI EFKDSKEIII SNVIFQNSPF
201: WNIHPVYCSN VVIHHVTILA PQDSPNTDGI DPDSSYNVCI EDSYISTGDD LVAIKSGWDQ YGIAYGRPSS NITIRRITGS SPFAGIAIGS ETSGGIKNII
301: AEHITLSNMG VGVNIKTNIG RGGYIKNIKI SDVYVDTAKY GIKIAGDTGD HPDENYNPNA LPVVKGIHIK NVWGVNVRNA GSIQGLKGSP FTGICLSEIN
401: LHGSLNSYKT WKCSDVSGTS LKVSPWPCSE LRTTGGSNLC SSTF

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SUP5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.