CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99037	Soybean	nucleus	96.61	96.83
KRH14547	Soybean	extracellular	81.72	81.17
KRH73576	Soybean	extracellular	48.31	77.54
VIT_02s0025g01330.t01	Wine grape	extracellular	75.39	74.72
PGSC0003DMT400031687	Potato	extracellular	74.27	73.6
CDY03516	Canola	extracellular, vacuole	73.36	73.2
AT4G23820.1	Thale cress	extracellular, vacuole	73.14	72.97
CDY47619	Canola	extracellular, vacuole	73.14	72.97
Bra013734.1-P	Field mustard	extracellular, vacuole	72.91	72.75
GSMUA_Achr10P...	Banana	cytosol	67.27	72.33
GSMUA_Achr8P19900_001	Banana	cytosol	67.72	72.29
Solyc08g082170.2.1	Tomato	nucleus	75.17	71.31
CDY10970	Canola	extracellular, vacuole	72.46	71.18
CDX94222	Canola	extracellular	72.46	71.18
Bra019264.1-P	Field mustard	extracellular, vacuole	72.23	70.95
GSMUA_Achr6P14280_001	Banana	cytosol	63.43	69.9
GSMUA_Achr4P08470_001	Banana	extracellular	63.66	68.61
Os01t0618900-01	Rice	cytosol, extracellular	49.66	66.87
Bra028511.1-P	Field mustard	extracellular	65.69	65.1
CDX67513	Canola	extracellular	65.69	65.1
AT5G41870.1	Thale cress	extracellular	65.46	64.59
Os02t0256100-01	Rice	extracellular	64.33	64.33
CDY13383	Canola	extracellular	64.56	64.27
EES20030	Sorghum	extracellular	63.43	64.01
Os05t0587000-01	Rice	extracellular	64.11	63.39
EES04867	Sorghum	extracellular, plasma membrane	62.75	62.05
TraesCS3B01G253000.1	Wheat	extracellular	62.98	62.0
Zm00001d053395_P001	Maize	extracellular	62.98	61.86
GSMUA_Achr4P15650_001	Banana	extracellular, plasma membrane, vacuole	56.66	61.82
TraesCS3D01G230000.1	Wheat	extracellular	62.08	61.11
EES01085	Sorghum	extracellular	61.63	61.07
Zm00001d009717_P001	Maize	extracellular	59.37	58.97
Zm00001d011369_P001	Maize	extracellular	58.92	58.65
HORVU3Hr1G054810.4	Barley	extracellular	61.85	50.65
KRH68340	Soybean	nucleus	51.69	48.93
KRG96607	Soybean	extracellular	51.47	48.72
KRH69147	Soybean	nucleus	50.56	48.28
KRH33649	Soybean	nucleus	49.66	47.41
KRH37050	Soybean	extracellular, vacuole	46.73	45.8
KRH50791	Soybean	extracellular	46.28	45.66
KRH55874	Soybean	cytosol	6.77	45.45
KRH69264	Soybean	extracellular	46.5	45.27
KRH02302	Soybean	extracellular	45.37	44.77
KRH31843	Soybean	extracellular	45.82	44.52
KRH12027	Soybean	extracellular, vacuole	46.95	44.16
KRH53903	Soybean	extracellular, plasma membrane, plastid	47.4	44.03
KRG91587	Soybean	cytosol, extracellular, plastid	23.7	43.03
KRG96478	Soybean	endoplasmic reticulum, extracellular	46.73	42.95
KRH35238	Soybean	extracellular	45.15	42.92
KRH35240	Soybean	extracellular	44.92	42.25
KRH00832	Soybean	nucleus	46.05	42.15
KRH48075	Soybean	extracellular	45.82	42.12
KRH59960	Soybean	nucleus	46.73	42.07
KRH40394	Soybean	extracellular, nucleus	45.82	41.94
KRH35239	Soybean	extracellular, plasma membrane, plastid	45.37	41.88
KRH48076	Soybean	extracellular	44.7	41.77
KRH41230	Soybean	nucleus	46.5	41.7
KRH68221	Soybean	extracellular	46.5	41.45
KRH06594	Soybean	mitochondrion	45.37	40.94
KRH38380	Soybean	extracellular	43.79	40.76
KRH19342	Soybean	endoplasmic reticulum	45.15	40.73
KRH12568	Soybean	plastid	44.92	40.7
KRH08861	Soybean	extracellular	43.57	40.46
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	44.92	40.45
KRH37525	Soybean	extracellular, plasma membrane	44.92	40.28
KRH33610	Soybean	plastid	9.48	23.33
KRG95330	Soybean	extracellular, plasma membrane, vacuole	20.77	19.74

Protein Annotations

EntrezGene:100816170	Gene3D:2.160.20.10	MapMan:50.3.2	EMBL:ACUP02005298	EnsemblPlantsGene:GLYMA_08G303200	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	UniProt:I1KXV7	InterPro:IPR012334	EnsemblPlants:KRH45957	ProteinID:KRH45957	ProteinID:KRH45957.1
PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF3	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI00023CABF2	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:42127798..42132919

Molecular Weight (calculated)

48329.7 Da

IEP (calculated)

8.455

GRAVY (calculated)

-0.034

Length

443 amino acids

Sequence
(BLAST)

001: MLLPPFLTLT FLLLFFNASV AAIYSTTTCS NIVSLRYRSD RISVTDFGGV GDGRTLNTKA FRAAVYRIQH LRRRGGTVLY VPPGVYLTES FNLTSHMTLY
101: LAAGAVIKAT QELGNWPLIA PLPSYGRGRE LPGGRYMSFI HGDGLSDVVI TGENGTIDGQ GDVWWNMWRQ RTLQFTRPNL VEFVNSQDII ISNVIFKNSP
201: FWNIHPVYCS NVVVRYVTIL APRDSPNTDG IDPDSSSNVC IEDSYISTGD DLVAVKSGWD EYGIAYGRPS YGITIRRLTG SSPFAGIAIG SETSGGVENV
301: LAEHINLFNM GVGIHIKTNS GRGGLIKNIT VAHVYVENAR QGIKIAGDVG GHPDEKFNPN ALPVVKGITI KNVWGVRVNQ AGLIHGLRNS PFTDVCLSNI
401: NFHGMRGPRS PSWKCSDVFG FAHQVSPWPC SQLSSQEPGS CAI

Best Arabidopsis Sequence Match ( AT4G23820.1 )
(BLAST)

001: MWRLSVSIFL FSCLFVSSSS LGDSEATCSG IVPLRYRYDK ISITDFGGVG DGRTVNTKAF RAAIYRIQHL KRRGGTLLYI PPGVYLTESF NLTSHMTLYL
101: AKGAVIRAVQ DTWNWPLIDP LPSYGRGREL PGGRYMSFIH GDGLRDVVIT GQNGTIDGQG EVWWNMWRSR TLKYTRPNLI EFKDSKEIII SNVIFQNSPF
201: WNIHPVYCSN VVIHHVTILA PQDSPNTDGI DPDSSYNVCI EDSYISTGDD LVAIKSGWDQ YGIAYGRPSS NITIRRITGS SPFAGIAIGS ETSGGIKNII
301: AEHITLSNMG VGVNIKTNIG RGGYIKNIKI SDVYVDTAKY GIKIAGDTGD HPDENYNPNA LPVVKGIHIK NVWGVNVRNA GSIQGLKGSP FTGICLSEIN
401: LHGSLNSYKT WKCSDVSGTS LKVSPWPCSE LRTTGGSNLC SSTF

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SUP5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.