CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31843	Soybean	extracellular	93.19	92.98
KRG96478	Soybean	endoplasmic reticulum, extracellular	76.92	72.61
KRH68221	Soybean	extracellular	77.8	71.23
VIT_07s0005g00890.t01	Wine grape	extracellular	66.81	63.73
KRH50791	Soybean	extracellular	62.42	63.25
KRH02302	Soybean	extracellular	62.2	63.03
KRH37050	Soybean	extracellular, vacuole	62.2	62.61
GSMUA_Achr5P00100_001	Banana	cytosol, extracellular, plastid	57.36	61.85
PGSC0003DMT400081328	Potato	extracellular	61.76	61.22
PGSC0003DMT400018848	Potato	extracellular	60.66	60.39
Solyc06g009790.2.1	Tomato	extracellular	60.44	60.18
KRH12027	Soybean	extracellular, vacuole	61.98	59.87
Solyc09g075460.2.1	Tomato	extracellular	60.88	57.71
Os12t0554800-01	Rice	cytosol, extracellular	52.75	56.6
Os11t0658800-01	Rice	extracellular	55.6	56.35
TraesCS4D01G146700.1	Wheat	extracellular, golgi, vacuole	55.82	55.58
KXG29050	Sorghum	extracellular	54.73	55.21
Zm00001d023813_P001	Maize	extracellular, vacuole	55.82	55.1
TraesCS4B01G144700.2	Wheat	extracellular, golgi, vacuole	54.73	54.49
TraesCS4A01G168800.1	Wheat	extracellular, golgi, vacuole	54.73	54.49
TraesCS5B01G097100.2	Wheat	extracellular	53.41	54.12
TraesCS5D01G102900.1	Wheat	unclear	53.41	54.12
GSMUA_Achr11P...	Banana	extracellular, vacuole	51.43	52.58
TraesCS5A01G090800.2	Wheat	extracellular, golgi, mitochondrion, plastid	53.63	51.48
Zm00001d048696_P001	Maize	extracellular	54.07	49.8
KRH69147	Soybean	nucleus	50.77	49.78
HORVU5Hr1G023800.7	Barley	plastid	55.6	49.32
KRG96607	Soybean	extracellular	50.55	49.15
KRH33649	Soybean	nucleus	50.11	49.14
KRH68340	Soybean	nucleus	49.89	48.5
GSMUA_Achr11P...	Banana	extracellular	58.02	48.09
KRH55874	Soybean	cytosol	6.81	46.97
KRH14547	Soybean	extracellular	45.71	46.64
KRG99037	Soybean	nucleus	45.27	46.61
KRH45957	Soybean	extracellular	45.27	46.5
KRH73576	Soybean	extracellular	27.25	44.93
KRH35238	Soybean	extracellular	44.4	43.35
KRH35240	Soybean	extracellular	44.18	42.68
KRH35239	Soybean	extracellular, plasma membrane, plastid	44.84	42.5
KRH59960	Soybean	nucleus	45.93	42.48
KRH40394	Soybean	extracellular, nucleus	45.05	42.36
KRH00832	Soybean	nucleus	45.05	42.36
KRH48075	Soybean	extracellular	44.84	42.32
KRH48076	Soybean	extracellular	43.96	42.19
KRH08861	Soybean	extracellular	43.96	41.93
KRH41230	Soybean	nucleus	45.49	41.9
KRH38380	Soybean	extracellular	43.74	41.81
KRH53903	Soybean	extracellular, plasma membrane, plastid	43.74	41.72
KRH06594	Soybean	mitochondrion	44.84	41.55
GSMUA_Achr11P...	Banana	cytosol	54.95	37.76
KRG91587	Soybean	cytosol, extracellular, plastid	20.0	37.3
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	39.12	36.18
KRH19342	Soybean	endoplasmic reticulum	38.9	36.05
KRH12568	Soybean	plastid	37.8	35.17
KRH37525	Soybean	extracellular, plasma membrane	37.58	34.62
KRH33610	Soybean	plastid	10.55	26.67
KRG95330	Soybean	extracellular, plasma membrane, vacuole	23.08	22.53

Protein Annotations

EntrezGene:100801823	Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A0R0KR00	EMBL:ACUP02000698	EnsemblPlantsGene:GLYMA_02G015600
GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlants:KRH69264
ProteinID:KRH69264	ProteinID:KRH69264.1	PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF5	InterPro:PbH1
InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0002337A81
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:1395956..1400025

Molecular Weight (calculated)

48968.7 Da

IEP (calculated)

5.177

GRAVY (calculated)

-0.018

Length

455 amino acids

Sequence
(BLAST)

001: MKRLVTVLLL IILSTALEGN GEDDHEPCKE KVLDPRPHSV SILEFGAVGD GKTLNTVAFQ NAVFYAKSFA DKGGAKLYVP SGKWLTGSFN LTSHLTLFLE
101: RGATIIASQD YAHWTAMDPL PSYGRGIDVP VGRYRSLIYG QNLSDVVITG DNGIIDGQGS VWWDLISTHS LNYSRPHIIE LVGSDNIIIS NLTFLNSPAW
201: SIHPVYCSNI QIQKITVQAP TKFPYTSGIV PDSSEHVCID NCNISTGHDA IVLKSGWDEY GVAYGKPTSN VHIRGVYLQS SSGAGLAFGS EMSGGISDII
301: AEQLHITNST FGIELKTTRG RGGYMKNIFI SDAKLENIYL GISMTGSSGS HPDDKYDPNA VPDVGNVTFE NVIGANIAIA GNFSGIVDSP FTPICLSNVT
401: FSTSSESSPS WFCSNVMGIS KEVFPEPCPD LQNTYSNFSS CFSSLHPSSS FVSSA

Best Arabidopsis Sequence Match ( AT3G06770.2 )
(BLAST)

001: MSVVTILILA LTSVIPIYAN VHGAGKICDE LGRRSLSTRP HSVSITDFGA VGDGKTLNTL AFQNAVFYLM SFADKGGAQL YVPPGHWLTG SFSLTSHLTL
101: FLENGAVIVA SQDPSHWEVV DPLPSYGRGI DLPGKRYKSL INGNKLHDVV VTGDNGTIDG QGLVWWDRFT SHSLKYNRPH LIEFLSSENV IVSNLTFLNA
201: PAYSIYSIYS SHVYIHKILA HSSPKSPYTI GIVPDSSDYV CIQNSTINVG YDAISLKSGW DEYGIAYSRP TENVHIRNVY LRGASGSSIS FGSEMSGGIS
301: DVVVDNAHIH YSLTGIAFRT TKGRGGYIKE IDISNIDMLR IGTAIVANGS FGSHPDDKYD VNALPLVSHI RLSNISGENI GIAGKLFGIK ESPFSSVTLS
401: NVSLSMSSGS SVSWQCSYVY GSSESVIPEP CPELKRDADA YGRAAV

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN94]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.