CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 2
mitochondrion 1
extracellular 3
plasma membrane 4
endoplasmic reticulum 2
vacuole 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12568	Soybean	plastid	95.55	96.52
KRH19342	Soybean	endoplasmic reticulum	78.95	79.43
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	77.94	78.25
VIT_11s0016g00720.t01	Wine grape	extracellular, peroxisome, plastid	74.49	74.64
Solyc07g042160.2.1	Tomato	nucleus	73.89	73.89
AT1G19170.1	Thale cress	cytosol, extracellular, mitochondrion, peroxisome	72.87	71.15
Solyc12g009210.1.1	Tomato	nucleus	70.65	70.51
CDX96676	Canola	extracellular, golgi, plastid	72.06	70.22
CDX83782	Canola	extracellular, golgi, plastid	72.06	70.22
PGSC0003DMT400007594	Potato	extracellular	70.24	70.1
Bra016521.1-P	Field mustard	extracellular, golgi, plastid	71.86	70.02
GSMUA_Achr3P10280_001	Banana	mitochondrion	67.81	69.94
KRH55874	Soybean	cytosol	9.31	69.7
GSMUA_Achr5P22120_001	Banana	extracellular	69.23	69.51
GSMUA_Achr9P18190_001	Banana	mitochondrion	69.03	69.45
Os02t0781000-01	Rice	extracellular	39.27	68.07
GSMUA_Achr11P...	Banana	mitochondrion	63.56	63.95
TraesCS6B01G371200.2	Wheat	mitochondrion	63.97	63.84
EES05901	Sorghum	extracellular, golgi	64.57	63.8
Zm00001d052103_P001	Maize	plasma membrane	63.77	63.64
TraesCS6D01G320600.1	Wheat	mitochondrion	63.56	63.43
TraesCS6A01G340000.1	Wheat	mitochondrion	63.36	63.23
GSMUA_Achr8P23620_001	Banana	extracellular, golgi, mitochondrion, plasma membrane	61.34	60.72
KRG99037	Soybean	nucleus	40.49	45.25
KRH45957	Soybean	extracellular	40.28	44.92
KRH73576	Soybean	extracellular	24.9	44.57
KRH14547	Soybean	extracellular	39.68	43.95
KRH68340	Soybean	nucleus	40.69	42.95
KRH33649	Soybean	nucleus	40.28	42.89
KRH69147	Soybean	nucleus	40.08	42.67
KRG96607	Soybean	extracellular	40.28	42.52
KRH35240	Soybean	extracellular	40.28	42.25
KRH35239	Soybean	extracellular, plasma membrane, plastid	40.49	41.67
KRH35238	Soybean	extracellular	38.87	41.2
KRH53903	Soybean	extracellular, plasma membrane, plastid	38.66	40.04
KRH41230	Soybean	nucleus	39.88	39.88
KRH59960	Soybean	nucleus	39.68	39.84
KRH48075	Soybean	extracellular	38.66	39.63
KRH38380	Soybean	extracellular	38.06	39.5
KRH08861	Soybean	extracellular	38.06	39.41
KRG91587	Soybean	cytosol, extracellular, plastid	19.43	39.34
KRH00832	Soybean	nucleus	38.46	39.26
KRH40394	Soybean	extracellular, nucleus	37.85	38.64
KRH06594	Soybean	mitochondrion	37.65	37.88
KRH50791	Soybean	extracellular	34.41	37.86
KRH02302	Soybean	extracellular	34.21	37.64
KRH69264	Soybean	extracellular	34.62	37.58
KRH48076	Soybean	extracellular	36.03	37.55
KRH37050	Soybean	extracellular, vacuole	34.01	37.17
KRH31843	Soybean	extracellular	34.21	37.06
KRH12027	Soybean	extracellular, vacuole	34.82	36.52
KRG96478	Soybean	endoplasmic reticulum, extracellular	35.22	36.1
KRH68221	Soybean	extracellular	35.43	35.21
KRG95330	Soybean	extracellular, plasma membrane, vacuole	23.28	24.68
KRH33610	Soybean	plastid	8.91	24.44

Protein Annotations

EntrezGene:100800910	Gene3D:2.160.20.10	MapMan:50.3.2	EMBL:ACUP02005458	EnsemblPlantsGene:GLYMA_09G071500	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	UniProt:I1L1S2	InterPro:IPR012334	EnsemblPlants:KRH37525	ProteinID:KRH37525	ProteinID:KRH37525.1
PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF21	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	UniParc:UPI0002337BA4	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:7308738..7314661

Molecular Weight (calculated)

54702.0 Da

IEP (calculated)

9.543

GRAVY (calculated)

-0.129

Length

494 amino acids

Sequence
(BLAST)

001: MVESTEQGGR GILGLFQFQL LHPKTTPFAS HKTLLAFLWV ATLASVLLWQ RTTISGFLVQ GGVPVRAPPK LRPVVFCLTE FGGVGDGVTL NTEAFERGVG
101: AISKLGDKGG GQLNVPPGRW LTAPFNLTSH MTLFLARDSV ILAVQDEKYW PLMPALPSYG YGREHPGPRY SSLIHGQNLR DVVITGHNGT INGQGQTWWT
201: KYRQKLLNHT RGPLVQILWS SNIVISNITL RDSPFWTLHP YDCKNVTVKN VTILAPVSHA PNTDGIDPDS CEDMLIEDCY ISVGDDAIAI KSGWDQYGIT
301: YGRPSKNIVI RNLVVRSNVS AGISIGSEMS GGVSNVLVEN ILVWESRRAM RIKTAPGRGG YVRQITYKNL MFKNVRVGIV IKTDYNEHPG TGYDPRALPI
401: LRDISFINIR GQGVRVPVRI QGSEQIPVRN VTFQDMKIGI TYKKKHIFQC AFVQGQAIGT IFPSPCDSFD RYNEQGQLVK HAASQNVTDI DYEI

Best Arabidopsis Sequence Match ( AT1G19170.1 )
(BLAST)

001: MVENLFPSRF QFHLQRLDPK RRLTSLLASH KTLFTFLWIT AFGSVFLWQR TAYIEGGSGT GPVGGKFTIF GKIKPIQPIP RLRPVVFDLK DFGGVGDGFT
101: LNTEAFERAV ISISKLGGSS GGGQLNVPPG RWLTAPFNLT SHMTLFLAED SEILGVEDEK YWPLMPPLPS YGYGRERPGP RYGSLIHGQN LKDIVITGHN
201: GTINGQGQSW WKKHQRRLLN YTRGPLVQIM WSSDIVIANI TMRDSPFWTL HPYDCKNVTI RNVTILAPVT GAPNTDGIDP DSCEDMVIED CYISTGDDAI
301: AIKSGWDQFG IAYGRPSTNI LIRNLVVRSV ISAGVSIGSE MSGGISNVTI ENLLIWNSRR GIRIKTAPGR GGYIRNITYK NLTLDNVRVG IVIKTDYNEH
401: ADDNYDRKAY PILSGFSFAG IHGQGVRVPV RIHGSEQIPV RNVTFRDMSV GLTYKKKHIF QCSFVKGRVF GSIFPRPCEN FDVYDEEGRL VKPAAESNVA
501: DIDYDI

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IE17]
SUBAcon: [mitochondrion,peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.