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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH33649 Soybean nucleus 96.77 96.77
KRH68340 Soybean nucleus 81.47 80.77
KRG96607 Soybean extracellular 81.03 80.34
VIT_07s0005g02590.t01 Wine grape extracellular, vacuole 78.66 78.33
GSMUA_Achr8P06180_001 Banana extracellular 59.05 69.72
AT3G62110.1 Thale cress vacuole 68.97 67.94
GSMUA_AchrUn_... Banana extracellular 56.9 67.18
CDY25090 Canola extracellular, golgi 65.52 66.38
Bra003485.1-P Field mustard extracellular, golgi 65.3 66.16
CDX67875 Canola extracellular, golgi 65.3 66.16
Bra007662.1-P Field mustard extracellular, plasma membrane 64.22 64.78
CDY11403 Canola extracellular, plasma membrane 64.01 64.57
TraesCS4A01G358700.1 Wheat extracellular 62.28 64.37
EER90587 Sorghum extracellular 64.87 63.37
CDX76617 Canola extracellular, plasma membrane 62.72 63.26
Os03t0833800-01 Rice extracellular 64.44 62.82
TraesCS5B01G513100.1 Wheat extracellular 63.36 61.76
HORVU5Hr1G117470.3 Barley extracellular 63.15 61.55
Os07t0245200-01 Rice plasma membrane 57.33 59.64
EER96131 Sorghum extracellular, mitochondrion 63.79 59.32
Zm00001d034727_P003 Maize plastid 63.58 57.5
Zm00001d019282_P001 Maize mitochondrion 62.5 57.09
TraesCS5D01G513600.1 Wheat plastid 63.36 55.37
KRH50791 Soybean extracellular 52.59 54.34
KRH37050 Soybean extracellular, vacuole 52.37 53.76
KRH02302 Soybean extracellular 51.72 53.45
KRH12027 Soybean extracellular, vacuole 52.37 51.59
KRH69264 Soybean extracellular 49.78 50.77
KRH45957 Soybean extracellular 48.28 50.56
KRH73576 Soybean extracellular 29.96 50.36
KRG99037 Soybean nucleus 47.84 50.23
KRH31843 Soybean extracellular 49.35 50.22
KRH14547 Soybean extracellular 48.06 50.0
KRG96478 Soybean endoplasmic reticulum, extracellular 51.72 49.79
KRH35238 Soybean extracellular 47.41 47.21
KRH68221 Soybean extracellular 50.43 47.08
KRH55874 Soybean cytosol 6.68 46.97
KRH48075 Soybean extracellular 48.71 46.89
KRH48076 Soybean extracellular 47.84 46.84
KRH00832 Soybean nucleus 48.71 46.69
KRH40394 Soybean extracellular, nucleus 48.71 46.69
KRH53903 Soybean extracellular, plasma membrane, plastid 47.63 46.33
KRH35239 Soybean extracellular, plasma membrane, plastid 47.63 46.04
KRH38380 Soybean extracellular 47.2 46.01
KRH08861 Soybean extracellular 47.2 45.91
KRH35240 Soybean extracellular 46.55 45.86
KRH06594 Soybean mitochondrion 48.49 45.82
KRH59960 Soybean nucleus 48.49 45.73
KRH41230 Soybean nucleus 48.28 45.34
KRG91587 Soybean cytosol, extracellular, plastid 23.49 44.67
KRH19342 Soybean endoplasmic reticulum 44.61 42.16
KRH02590 Soybean extracellular, golgi, mitochondrion, plastid 44.61 42.07
KRH12568 Soybean plastid 43.1 40.9
KRH37525 Soybean extracellular, plasma membrane 42.67 40.08
KRH33610 Soybean plastid 10.34 26.67
KRG95330 Soybean extracellular, plasma membrane, vacuole 22.84 22.75
Protein Annotations
EntrezGene:100786985Gene3D:2.160.20.10MapMan:50.3.2EMBL:ACUP02000689EnsemblPlantsGene:GLYMA_02G007600GO:GO:0003674
GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0016798GO:GO:0071555
InterPro:Glyco_hydro_28UniProt:I1JBA6InterPro:IPR012334EnsemblPlants:KRH69147ProteinID:KRH69147ProteinID:KRH69147.1
PFAM:PF00295PFscan:PS51257PANTHER:PTHR31339PANTHER:PTHR31339:SF9InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI000295C4B1SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:785557..790572
Molecular Weight (calculated)
50997.5 Da
IEP (calculated)
5.912
GRAVY (calculated)
-0.009
Length
464 amino acids
Sequence
(BLAST)
001: MKRLSTLVDV FLVLALFSCS TWTVWSSSCC NQINLNEVRP HSVSITEFGA VGDGITLNTK AFQNAIFYLN SFADKGGAKL FVPAGRWLTG SFDLISHLTL
101: WLDNDAVILG STNSDDWPVV DPLPSYGRGR ELPGGRHRSL IYGCNLTDVV ITGNNGTIDG QGSIWWNNFW NKTLNYTRPH LVELMNSTGV LISNVTFLNS
201: PFWTIHPVYC SHVTIQNVTI IAPLSSPNTD GINPDSSDNV CIEDCYISTG DDLISIKSGW DGYGISFGRP STNINIRRLI GKTTSAGIAI GSEMSGGVSE
301: VHAEDIYIFD SHSAIRIKTS PGRGGYVRNV YISNMILANV DIAIRFTGLY GEHPDDTYDP DALPVIERIT IKDVIGVKVK HAGLIQGIKG DNFVNICLSN
401: ITLNVSSKLP WNCSYIKGFS DLVSPEACEP LKERIFPEHC SDCYYLPNHL KSLSNQNWGA WLLS
Best Arabidopsis Sequence Match ( AT3G62110.2 )
(BLAST)
001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W
Arabidopsis Description
AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.