CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

plastid 2
mitochondrion 3
extracellular 3
plasma membrane 3
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019282_P001	Maize	mitochondrion	89.58	87.99
Os07t0245200-01	Rice	plasma membrane	74.55	83.41
EER90587	Sorghum	extracellular	73.95	77.68
GSMUA_Achr8P06180_001	Banana	extracellular	55.31	70.23
GSMUA_AchrUn_...	Banana	extracellular	54.71	69.47
VIT_07s0005g02590.t01	Wine grape	extracellular, vacuole	60.52	64.81
KRG96607	Soybean	extracellular	59.92	63.89
KRH69147	Soybean	nucleus	59.32	63.79
KRH68340	Soybean	nucleus	59.72	63.68
KRH33649	Soybean	nucleus	58.72	63.15
AT3G62110.1	Thale cress	vacuole	58.92	62.42
CDY25090	Canola	extracellular, golgi	56.31	61.35
Bra003485.1-P	Field mustard	extracellular, golgi	56.11	61.14
CDX67875	Canola	extracellular, golgi	56.11	61.14
CDY11403	Canola	extracellular, plasma membrane	55.31	60.0
Bra007662.1-P	Field mustard	extracellular, plasma membrane	55.31	60.0
CDX76617	Canola	extracellular, plasma membrane	54.11	58.7
KXG29050	Sorghum	extracellular	46.69	51.66
EES01085	Sorghum	extracellular	45.49	50.78
EES20030	Sorghum	extracellular	44.09	50.11
EES04867	Sorghum	extracellular, plasma membrane	43.09	47.99
EER89047	Sorghum	extracellular, vacuole	46.49	46.87
EER95599	Sorghum	extracellular	43.49	46.87
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	43.89	44.06
EES05901	Sorghum	extracellular, golgi	40.88	40.8
EER96790	Sorghum	plastid	39.08	37.64
EER99085	Sorghum	extracellular, plasma membrane	21.64	23.38

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	EntrezGene:8054405	UniProt:C5X216	EnsemblPlants:EER96131	ProteinID:EER96131
ProteinID:EER96131.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334
PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF20	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	EnsemblPlantsGene:SORBI_3002G090400	SUPFAM:SSF51126	unigene:Sbi.2067	TMHMM:TMhelix	UniParc:UPI0001A83A33
RefSeq:XP_002459610.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:9437694..9441313

Molecular Weight (calculated)

54104.0 Da

IEP (calculated)

6.834

GRAVY (calculated)

-0.033

Length

499 amino acids

Sequence
(BLAST)

001: MLSSSRKMSR SATVRGAIIS YWIFQVLLVF TTIVAQTQWA SVWGMYCEDL TASVERPHSA SITDFGAVGD GATLNTKAFQ NALFYLNSFA KKGGAQLFVP
101: AGRWLTGSFS LISHLTLSLD KDAVILGSTD SSDWPVIDAL PSYGRGRELP GKRHQSLIFG SNLTDVIITG SNGTIDGQGA VWWDWFHNHT LNYTRPPLVE
201: LMYSTRVVIS NLTFINSPFW NIHPVYCSQV LAQHLTILAP ISSPNTDGID PDSSTNVCIE DCYIRNGDDI VVIKSGWDEY GISFAHPSSN ISIRNITGQT
301: RNSAGLAFGS EMSGGISDVR AEGIRIVNSV HGIRIKTAPG RGGYVKNVYV ADVSFDNVSI AIRITGNYGE HPDDRYNKSA LPTISNITIK DVVGVNIGVA
401: GMLQGIPGDN FSNICLSNVS LSVRSTDPWN CSLVEGYSNS VSPEVCEQLR TSPGPGQICY GSNYPAAAAQ PQPQPQPLQK SSASRLVNPF LSISWFLCR

Best Arabidopsis Sequence Match ( AT3G62110.2 )
(BLAST)

001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W

Arabidopsis Description

AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.