CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, extracellular, plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 1
plasma membrane 2
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034990_P001	Maize	plasma membrane	88.33	89.05
TraesCS7A01G323800.3	Wheat	plastid	80.89	82.89
TraesCS7D01G320900.1	Wheat	plastid	80.28	82.27
TraesCS7B01G224700.1	Wheat	plastid	80.28	82.27
Os08t0107300-00	Rice	extracellular, mitochondrion	79.28	81.74
HORVU7Hr1G077560.12	Barley	plastid	66.6	68.53
CDX75352	Canola	extracellular	58.95	62.08
Bra011440.1-P	Field mustard	extracellular	59.15	62.03
CDX68976	Canola	extracellular	58.55	61.78
GSMUA_Achr2P08050_001	Banana	cytosol, extracellular, golgi, mitochondrion	54.93	61.76
AT4G33440.1	Thale cress	extracellular	57.55	60.21
CDY46115	Canola	extracellular	57.14	60.04
CDX72404	Canola	extracellular	56.74	59.62
Bra037005.1-P	Field mustard	extracellular	57.14	59.54
KRH53903	Soybean	extracellular, plasma membrane, plastid	57.14	59.54
PGSC0003DMT400030711	Potato	extracellular, golgi, nucleus	54.53	55.76
Solyc06g060170.2.1	Tomato	cytosol, golgi, plasma membrane	54.73	55.74
VIT_04s0044g01420.t01	Wine grape	extracellular, golgi, vacuole	56.94	54.74
EES01085	Sorghum	extracellular	43.86	48.77
EES04867	Sorghum	extracellular, plasma membrane	43.46	48.21
EES20030	Sorghum	extracellular	42.25	47.84
EER90587	Sorghum	extracellular	42.86	44.84
KXG29050	Sorghum	extracellular	40.04	44.12
EER89047	Sorghum	extracellular, vacuole	43.86	44.04
EER96131	Sorghum	extracellular, mitochondrion	44.06	43.89
EER95599	Sorghum	extracellular	40.85	43.84
EES05901	Sorghum	extracellular, golgi	40.85	40.6
EER96790	Sorghum	plastid	41.45	39.77
EER99085	Sorghum	extracellular, plasma membrane	21.73	23.38

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A1B6PF73	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334
EnsemblPlants:KXG24195	ProteinID:KXG24195	ProteinID:KXG24195.1	PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF4
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3007G006700	SUPFAM:SSF51126
UniParc:UPI00081AC25A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:580892..584784

Molecular Weight (calculated)

53633.5 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.109

Length

497 amino acids

Sequence
(BLAST)

001: MAAAHATKAA HAADDHDASP LPLPWPRPAP LLVILSLLAG ASYLALTRVP AFASSGRLVP AALLPIAPPR PHDSRSRDSC AGFYAGAGPS RAVTASVEEF
101: GAVGDGATPN TAAFRRAVAE LEARAGAGGA RLEVPPGRWL TGSFNLTSRF TLFLHRGAVI LGSQDPEEWP LIAPLPSYGR GRERLGPRHI SLIHGEGLND
201: VVITGSNGTI DGQGNMWWEL WWNRTLNHTR GHLIELVNST NILISSITLR NSPFWTVHPV YCSNVVMKDL TILAPLNAPN TDGIDPDSSS EVCIEDCYIE
301: SGDDLVAVKS GWDQYGISLG KPSTNIVIQR VSGTTPTCSG VGFGSEMSGG ISNVLVRDLH VWNSAQAVRL KTDVGRGGYI TNITISNVTM EKVKVPIRFS
401: RGADDHSDDN YDRTALPRIS NVLISDVVGV DLQRAPMLEA VPGAVYEEIC FRNFSLRGIR RQDRWHCESV YGEAHEVFPA PCEEFRKNGS SSWCGFI

Best Arabidopsis Sequence Match ( AT4G33440.1 )
(BLAST)

001: MEPEKNPTTV LSAITRPSWA FLLLVFTVLA ILSLQISSNS FLPLWIPTSQ YDDPVTCSGF FNHDPFPNRI VMSITDFGGV GDGKTSNTAA FRRAVRHLEG
101: FAAEGGAQLN VPEGTWLSGS FNLTSNFTLF LERGALILGS KDLDEWPIIE PLPSYGRGRE RPGGRHISLI HGDNLTNVVI TGENGTIDGQ GKMWWELWWN
201: RTLVHTRGHL IELKNSHNIL ISNLTLLNSP FWTIHPVYCS NVVIRNMTIL APMNAPNTDG IDPDSSTNVC IEDCYIESGD DLVAVKSGWD QYGMAVARPS
301: SNIVIRRISG TTRTCSGVGI GSEMSGGIFN ITVEDIHVWD SAAGLRIKTD KGRGGYISNI TFNNVLLEKV KVPIRFSSGS NDHSDDKWDP KALPRVKGIY
401: ISNVVSLNSR KAPMLLGVEG TSFQDVCLRN VTLLGLPKTE KWKCKDVSGY ASDVFPLSCP QLLQKKGSIA QCSYR

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84K13]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.