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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0618900-01 Rice cytosol, extracellular 66.0 89.67
Zm00001d011369_P001 Maize extracellular 88.14 88.54
TraesCS3B01G253000.1 Wheat extracellular 84.56 84.0
TraesCS3D01G230000.1 Wheat extracellular 84.12 83.56
EES20030 Sorghum extracellular 76.06 77.45
GSMUA_Achr4P08470_001 Banana extracellular 66.22 72.02
HORVU3Hr1G054810.4 Barley extracellular 83.67 69.13
GSMUA_Achr4P15650_001 Banana extracellular, plasma membrane, vacuole 60.18 66.26
PGSC0003DMT400031687 Potato extracellular 62.64 62.64
KRH73576 Soybean extracellular 38.26 61.96
KRH14547 Soybean extracellular 61.74 61.88
KRH45957 Soybean extracellular 61.07 61.63
KRG99037 Soybean nucleus 60.63 61.31
VIT_02s0025g01330.t01 Wine grape extracellular 60.4 60.4
EES04867 Sorghum extracellular, plasma membrane 60.4 60.27
Solyc08g082170.2.1 Tomato nucleus 62.64 59.96
CDY47619 Canola extracellular, vacuole 59.51 59.91
AT4G23820.1 Thale cress extracellular, vacuole 59.51 59.91
Bra013734.1-P Field mustard extracellular, vacuole 59.28 59.68
CDY03516 Canola extracellular, vacuole 59.06 59.46
CDX67513 Canola extracellular 58.39 58.39
Bra028511.1-P Field mustard extracellular 58.39 58.39
AT5G41870.1 Thale cress extracellular 58.61 58.35
CDY13383 Canola extracellular 57.94 58.2
CDX94222 Canola extracellular 58.39 57.87
CDY10970 Canola extracellular, vacuole 58.17 57.65
Bra019264.1-P Field mustard extracellular, vacuole 57.94 57.43
KXG29050 Sorghum extracellular 48.1 47.67
EER90587 Sorghum extracellular 49.44 46.53
EER96131 Sorghum extracellular, mitochondrion 50.78 45.49
EER95599 Sorghum extracellular 46.76 45.14
KXG24195 Sorghum endoplasmic reticulum, extracellular, plasma membrane, plastid 48.77 43.86
EER89047 Sorghum extracellular, vacuole 47.43 42.83
EES05901 Sorghum extracellular, golgi 44.74 40.0
EER96790 Sorghum plastid 42.95 37.07
EER99085 Sorghum extracellular, plasma membrane 23.49 22.73
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2EntrezGene:8054394UniProt:C5XR39EnsemblPlants:EES01085ProteinID:EES01085
ProteinID:EES01085.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339
PANTHER:PTHR31339:SF16InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710EnsemblPlantsGene:SORBI_3003G223100
SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0001A8437BRefSeq:XP_002455965.1SEG:seg:
Description
hypothetical protein
Coordinates
chr3:+:55904008..55906900
Molecular Weight (calculated)
47474.4 Da
IEP (calculated)
7.425
GRAVY (calculated)
0.002
Length
447 amino acids
Sequence
(BLAST)
001: MARRCPCRLL LAVVVLVLVS AAAQAQAQET CSGAVPAPPR RGARVSVASF GGAGDGRTLN TAAFARAVAT IERRAVPGGA ELYVPPGVWL TGPFNLTSRM
101: TLFLARGAVV RATQDTSSWP LIEPLPSYGR GRELPGGRYI SLIHGSGLQD VVITGENGTI DGQGTPWWDM WKKGTLLYTR PHLLELMSSS HIIVSNVVFQ
201: DSPFWNIHPV YCSNVVIRNV TILAPHDSPN TDGIDPDSSS NICIEDCYIS TGDDAIAIKS GWDEYGIAYG RPSSDITVRR ITGSSPFAGF AVGSETSGGV
301: ENVLAEHLNF FSSGFGIHIK TNTGRGGFIR NVTVSDVTLD NVRYGLRIVG DVGNHPDERY NRSALPIVDA LTIKNVQGQN IKEAGLIKGI ANSAFSRICL
401: SNVKLTGGAP VQPWKCEAVS GGALDVQPSP CTELTSTSGT SFCTNSL
Best Arabidopsis Sequence Match ( AT4G23820.1 )
(BLAST)
001: MWRLSVSIFL FSCLFVSSSS LGDSEATCSG IVPLRYRYDK ISITDFGGVG DGRTVNTKAF RAAIYRIQHL KRRGGTLLYI PPGVYLTESF NLTSHMTLYL
101: AKGAVIRAVQ DTWNWPLIDP LPSYGRGREL PGGRYMSFIH GDGLRDVVIT GQNGTIDGQG EVWWNMWRSR TLKYTRPNLI EFKDSKEIII SNVIFQNSPF
201: WNIHPVYCSN VVIHHVTILA PQDSPNTDGI DPDSSYNVCI EDSYISTGDD LVAIKSGWDQ YGIAYGRPSS NITIRRITGS SPFAGIAIGS ETSGGIKNII
301: AEHITLSNMG VGVNIKTNIG RGGYIKNIKI SDVYVDTAKY GIKIAGDTGD HPDENYNPNA LPVVKGIHIK NVWGVNVRNA GSIQGLKGSP FTGICLSEIN
401: LHGSLNSYKT WKCSDVSGTS LKVSPWPCSE LRTTGGSNLC SSTF
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SUP5]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.