CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0833800-01	Rice	extracellular	88.63	88.45
Zm00001d034727_P003	Maize	plastid	94.11	87.13
TraesCS4A01G358700.1	Wheat	extracellular	80.21	84.86
TraesCS5B01G513100.1	Wheat	extracellular	83.79	83.61
HORVU5Hr1G117470.3	Barley	extracellular	82.95	82.77
EER96131	Sorghum	extracellular, mitochondrion	77.68	73.95
TraesCS5D01G513600.1	Wheat	plastid	82.53	73.82
GSMUA_Achr8P06180_001	Banana	extracellular	59.16	71.5
GSMUA_AchrUn_...	Banana	extracellular	57.47	69.47
VIT_07s0005g02590.t01	Wine grape	extracellular, vacuole	65.26	66.52
KRH69147	Soybean	nucleus	63.37	64.87
KRG96607	Soybean	extracellular	62.74	63.68
KRH33649	Soybean	nucleus	61.89	63.36
KRH68340	Soybean	nucleus	62.11	63.03
AT3G62110.1	Thale cress	vacuole	62.11	62.63
CDY25090	Canola	extracellular, golgi	59.16	61.35
Bra003485.1-P	Field mustard	extracellular, golgi	58.53	60.7
CDX67875	Canola	extracellular, golgi	58.53	60.7
CDY11403	Canola	extracellular, plasma membrane	57.47	59.35
Bra007662.1-P	Field mustard	extracellular, plasma membrane	57.47	59.35
CDX76617	Canola	extracellular, plasma membrane	56.42	58.26
KXG29050	Sorghum	extracellular	50.11	52.77
EES01085	Sorghum	extracellular	46.53	49.44
EES20030	Sorghum	extracellular	45.26	48.97
EES04867	Sorghum	extracellular, plasma membrane	43.16	45.76
EER95599	Sorghum	extracellular	43.58	44.71
EER89047	Sorghum	extracellular, vacuole	46.32	44.44
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	44.84	42.86
EES05901	Sorghum	extracellular, golgi	41.47	39.4
EER96790	Sorghum	plastid	39.37	36.1
EER99085	Sorghum	extracellular, plasma membrane	21.89	22.51

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	EntrezGene:8079686	UniProt:C5WU20	EnsemblPlants:EER90587	ProteinID:EER90587
ProteinID:EER90587.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31339
PANTHER:PTHR31339:SF20	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3001G026800
SUPFAM:SSF51126	unigene:Sbi.20217	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00081AD4CF	:

Description

hypothetical protein

Coordinates

chr1:+:2094324..2098430

Molecular Weight (calculated)

51614.4 Da

IEP (calculated)

6.741

GRAVY (calculated)

-0.003

Length

475 amino acids

Sequence
(BLAST)

001: MKRSASLFQV LLVFITMVEI QWSTVSSIYC KDMPPNVYRP HSVTITEFGA IGDGVTLNTK AFQNAIFYLN SFADKGGAQL FVPAGRWLTG SFNLISHLTL
101: SLDKDAVIIG SPDSSHWPVI DPLPSYGRGR ELPGKRHQSL IFGLNLTDVI ITGANGSIDG QGAIWWGWFR NHTLNYTRPH LVELMYSTNV VISNLTFKNS
201: PFWNIHPVYC SQVLVQHVTI LAPLNSPNTD GVSPDSSTNV CINHCYVRNG DDVIVIKSGW DEYGISFAQP SSNISISDIT GETRGGAGIA FGSEMSGGIS
301: EVRAVGLRIV NSLHGIRIKT APGRGGYVKN VYIADVSMDN VSMAIRITGN YGEHPDDKYD RTALPVISNI TIKDVVGVNI GVAGILEGIQ GDNFSNICLS
401: NVSLSVQSAH PWNCSLIEGY SNSVIPESCE QLKSNCRQTP ICYDGSGSSA MHVQQPRHTS STSRLLNPLL ELASF

Best Arabidopsis Sequence Match ( AT3G62110.2 )
(BLAST)

001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W

Arabidopsis Description

AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.