Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11403 Canola extracellular, plasma membrane 96.52 96.52
CDX67875 Canola extracellular, golgi 88.04 88.43
CDY25090 Canola extracellular, golgi 87.61 87.99
AT3G62110.1 Thale cress vacuole 88.7 86.62
VIT_07s0005g02590.t01 Wine grape extracellular, vacuole 65.0 64.16
KRH33649 Soybean nucleus 63.48 62.93
KRG96607 Soybean extracellular 63.91 62.82
KRH69147 Soybean nucleus 63.26 62.72
KRH68340 Soybean nucleus 63.48 62.39
GSMUA_AchrUn_... Banana extracellular 51.74 60.56
GSMUA_Achr8P06180_001 Banana extracellular 51.3 60.05
TraesCS4A01G358700.1 Wheat extracellular 56.96 58.35
Os03t0833800-01 Rice extracellular 58.7 56.72
EER90587 Sorghum extracellular 58.26 56.42
TraesCS5B01G513100.1 Wheat extracellular 57.61 55.67
HORVU5Hr1G117470.3 Barley extracellular 57.17 55.25
EER96131 Sorghum extracellular, mitochondrion 58.7 54.11
CDY69951 Canola cytosol 14.78 53.97
Os07t0245200-01 Rice plasma membrane 50.87 52.47
Zm00001d019282_P001 Maize mitochondrion 57.83 52.36
Zm00001d034727_P003 Maize plastid 57.83 51.85
TraesCS5D01G513600.1 Wheat plastid 57.39 49.72
CDX92101 Canola extracellular, golgi 45.65 46.15
CDX75352 Canola extracellular 47.17 45.97
CDX71719 Canola mitochondrion 16.3 45.73
CDX95899 Canola extracellular 45.0 45.7
CDX82390 Canola extracellular 44.57 45.66
CDX68976 Canola extracellular 46.74 45.65
CDY54633 Canola extracellular 44.35 45.54
CDY47619 Canola extracellular, vacuole 43.91 45.5
CDY03516 Canola extracellular, vacuole 43.91 45.5
CDX72404 Canola extracellular 46.52 45.24
CDY46115 Canola extracellular 46.3 45.03
CDX74085 Canola cytoskeleton, cytosol, vacuole 36.96 44.74
CDY33922 Canola extracellular 43.04 44.59
CDX94222 Canola extracellular 43.7 44.57
CDY08036 Canola cytosol, nucleus, vacuole 36.52 44.56
CDY70893 Canola cytosol 34.35 44.13
CDY10970 Canola extracellular, vacuole 43.26 44.12
CDX67513 Canola extracellular 42.83 44.07
CDY13383 Canola extracellular 42.17 43.6
CDY53228 Canola extracellular 10.43 42.86
CDY05643 Canola extracellular, plasma membrane, plastid 44.35 42.68
CDY69255 Canola cytosol 34.57 42.29
CDY56436 Canola extracellular, vacuole 43.48 42.19
CDY48913 Canola extracellular 42.83 41.83
CDY05907 Canola cytosol 39.78 41.78
CDY65355 Canola extracellular 42.83 41.74
CDY08113 Canola extracellular 41.09 41.45
CDY44105 Canola cytosol, nucleus, plasma membrane 40.65 41.37
CDY10898 Canola cytosol 4.57 41.18
CDY05885 Canola extracellular 40.43 40.09
CDX86247 Canola plasma membrane, plastid 43.04 39.52
CDY39678 Canola extracellular 40.0 38.49
CDY20264 Canola extracellular 39.78 38.28
CDY10897 Canola cytosol, extracellular, peroxisome 19.78 38.08
CDY08095 Canola extracellular, plasma membrane 40.87 37.98
CDY27797 Canola extracellular, mitochondrion, plastid 38.04 34.93
CDY41934 Canola extracellular, mitochondrion, plastid 38.04 34.86
CDX83782 Canola extracellular, golgi, plastid 38.26 34.71
CDX96676 Canola extracellular, golgi, plastid 38.26 34.71
CDY10899 Canola cytosol 5.43 26.04
CDY02392 Canola extracellular, plasma membrane, vacuole 23.04 22.18
CDY12962 Canola extracellular, plasma membrane, vacuole 22.83 21.97
CDY11375 Canola mitochondrion 23.26 21.1
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078CIP4EnsemblPlants:CDX76617ProteinID:CDX76617ProteinID:CDX76617.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00127076001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF9InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126UniParc:UPI0004EEDB6D::
Description
BnaC08g32030D
Coordinates
chrLK031808:-:211578..213602
Molecular Weight (calculated)
50880.0 Da
IEP (calculated)
6.444
GRAVY (calculated)
-0.155
Length
460 amino acids
Sequence
(BLAST)
001: MLVFDVGYLQ LSYVLLVHAF YGAWCSVGGS LHCEYSNSQI LHRPHSVSIT EFGAVGDGFT LNTKAFQNAL FYLNTFSDKG GAKLFVPAGQ WLTGSFDLIS
101: HLTLWLDKGA TILGSTARRE LPGRRHRSLI YGQNLTDVVI TGENGTIDGQ GSIWWDWFRN GELRHTRPHL VELINTTGLI ISNLTFLNSP FWNIHPVYCR
201: DVFVKNLTIL APLDSPNTDG VDPDSSTNVC IEDCYIVTGD DLVSIKSGWD EYGISYARPS SKIKINRLTG QTTSSSGIAI GSEMSGGVSA IYIKDLHLFN
301: SNTGIRIKTS PGRGGYVRNV HVSNVKLDNV QKAIRFTGKY GEHPDGNFDT KALPAIEKIT FENVSGEDIG VAGLLEGIEG NEFKNICFLN VTLRVKKNSK
401: QAPWRCSNVR GYSQWVSPEI SCDSFEESIF PEHSSDCFGL SENNVETSSG LSRSPWLFFW
Best Arabidopsis Sequence Match ( AT3G62110.2 )
(BLAST)
001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W
Arabidopsis Description
AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.