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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82390 Canola extracellular 97.77 97.55
CDX92101 Canola extracellular, golgi 88.62 87.25
CDX95899 Canola extracellular 88.17 87.2
AT3G16850.1 Thale cress vacuole 85.49 84.18
CDX74085 Canola cytoskeleton, cytosol, vacuole 50.89 60.0
VIT_05s0077g01760.t01 Wine grape extracellular, vacuole 60.71 59.78
CDY08036 Canola cytosol, nucleus, vacuole 50.22 59.68
KRH37050 Soybean extracellular, vacuole 60.04 59.51
CDY33922 Canola extracellular 58.71 59.23
KRH50791 Soybean extracellular 58.93 58.8
KRH02302 Soybean extracellular 58.71 58.57
GSMUA_Achr5P00100_001 Banana cytosol, extracellular, plastid 54.24 57.58
KRH12027 Soybean extracellular, vacuole 60.27 57.32
CDY56436 Canola extracellular, vacuole 60.04 56.75
Solyc06g009790.2.1 Tomato extracellular 57.14 56.02
PGSC0003DMT400018848 Potato extracellular 56.92 55.8
CDY05643 Canola extracellular, plasma membrane, plastid 59.38 55.65
PGSC0003DMT400081328 Potato extracellular 56.7 55.34
Os12t0554800-01 Rice cytosol, extracellular 51.56 54.48
Zm00001d023813_P001 Maize extracellular, vacuole 55.8 54.23
VIT_05s0077g01740.t01 Wine grape nucleus 28.12 53.39
TraesCS5B01G097100.2 Wheat extracellular 53.35 53.23
Solyc09g075460.2.1 Tomato extracellular 56.92 53.12
TraesCS5D01G102900.1 Wheat unclear 53.12 53.01
KXG29050 Sorghum extracellular 53.12 52.77
CDX86247 Canola plasma membrane, plastid 58.93 52.69
Os11t0658800-01 Rice extracellular 51.79 51.67
TraesCS4D01G146700.1 Wheat extracellular, golgi, vacuole 52.68 51.64
TraesCS4B01G144700.2 Wheat extracellular, golgi, vacuole 52.01 50.98
CDY69951 Canola cytosol 14.29 50.79
TraesCS4A01G168800.1 Wheat extracellular, golgi, vacuole 51.56 50.55
TraesCS5A01G090800.2 Wheat extracellular, golgi, mitochondrion, plastid 53.35 50.42
GSMUA_Achr11P... Banana extracellular, vacuole 49.55 49.89
Zm00001d048696_P001 Maize extracellular 51.56 46.76
HORVU5Hr1G023800.7 Barley plastid 53.35 46.59
CDX67875 Canola extracellular, golgi 46.65 45.63
CDY25090 Canola extracellular, golgi 46.43 45.41
CDY11403 Canola extracellular, plasma membrane 46.21 45.0
CDY03516 Canola extracellular, vacuole 44.42 44.82
CDY47619 Canola extracellular, vacuole 44.42 44.82
CDX76617 Canola extracellular, plasma membrane 45.54 44.35
CDX94222 Canola extracellular 44.42 44.12
CDY13383 Canola extracellular 43.75 44.04
CDY10970 Canola extracellular, vacuole 44.2 43.9
GSMUA_Achr11P... Banana extracellular 53.79 43.9
CDX67513 Canola extracellular 43.75 43.85
CDX75352 Canola extracellular 43.53 41.31
CDY05885 Canola extracellular 42.63 41.16
CDX68976 Canola extracellular 43.08 40.98
CDY65355 Canola extracellular 43.08 40.89
CDX71719 Canola mitochondrion 14.96 40.85
CDY46115 Canola extracellular 43.08 40.8
CDX72404 Canola extracellular 42.86 40.59
CDY70893 Canola cytosol 32.37 40.5
CDY05907 Canola cytosol 39.51 40.41
CDY48913 Canola extracellular 42.41 40.34
CDY08113 Canola extracellular 39.96 39.25
CDY20264 Canola extracellular 41.74 39.12
CDY69255 Canola cytosol 32.81 39.1
CDY44105 Canola cytosol, nucleus, plasma membrane 39.29 38.94
CDY39678 Canola extracellular 41.52 38.91
CDY10897 Canola cytosol, extracellular, peroxisome 20.76 38.91
CDY08095 Canola extracellular, plasma membrane 42.41 38.38
GSMUA_Achr11P... Banana cytosol 53.12 35.95
CDX83782 Canola extracellular, golgi, plastid 39.06 34.52
CDX96676 Canola extracellular, golgi, plastid 38.84 34.32
CDY27797 Canola extracellular, mitochondrion, plastid 37.72 33.73
CDY41934 Canola extracellular, mitochondrion, plastid 37.72 33.67
CDY10898 Canola cytosol 3.79 33.33
CDY53228 Canola extracellular 8.04 32.14
CDY10899 Canola cytosol 5.13 23.96
CDY12962 Canola extracellular, plasma membrane, vacuole 22.54 21.13
CDY02392 Canola extracellular, plasma membrane, vacuole 22.54 21.13
CDY11375 Canola mitochondrion 23.44 20.71
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078IZ56UniProt:A0A078IZ56EnsemblPlants:CDY54633ProteinID:CDY54633
ProteinID:CDY54633.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00014430001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
PANTHER:PTHR31339PANTHER:PTHR31339:SF15InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710
SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EEB809:::
Description
BnaCnng27510DBnaCnng27510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZ56]
Coordinates
chrLK033336:+:60952..64137
Molecular Weight (calculated)
48540.2 Da
IEP (calculated)
5.822
GRAVY (calculated)
-0.027
Length
448 amino acids
Sequence
(BLAST)
001: MQVALVWLLA FTNILLIRGE SNDAICKDHF KLDPRPHSVS ILEFGAVGDG NYLNTLAFQN AIFYLKSFAD KGGAQLYVPP GKWLTGSFNL TSHLTLFLEK
101: GATILASPDQ SHWDTVSSLP SYGRGKRYRS LINGDNLLDV VITGDNGTFD GQGAVWWEWF ESGTLNYSRP HIIELVSSKN ILISNLTFLN APSVNIHPVY
201: CSHVHIRKVL IETTVDSPYV LGVVPDSSDN VCIEDSTINV GHDTISLKSG WDQYGINYNR PTTNVHIRNL SLKSPTGAAI SFGSEMSGGI SDVTVELLTI
301: QSSHVGVAFR TTRGRGGYIR NITISGVILS RVDTAIVADG HTGSHADDKY DRDALPVVTH VLMRNFTGEG IGLAGKFTGI GESPFTSICL SDIHLQTSSE
401: SWVCSNVSGF SDDVTPEPCQ ELMSSPSSCF AGGGIYGGDT AARAYYSW
Best Arabidopsis Sequence Match ( AT3G16850.1 )
(BLAST)
001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.