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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, vacuole
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G146700.1 Wheat extracellular, golgi, vacuole 96.94 96.94
TraesCS4A01G168800.1 Wheat extracellular, golgi, vacuole 95.4 95.4
Os11t0658800-01 Rice extracellular 80.09 81.51
KXG29050 Sorghum extracellular 78.56 79.6
TraesCS5B01G097100.2 Wheat extracellular 72.87 74.16
Zm00001d048696_P001 Maize extracellular 76.37 70.65
GSMUA_Achr5P00100_001 Banana cytosol, extracellular, plastid 61.27 66.35
GSMUA_Achr11P... Banana extracellular, vacuole 56.67 58.2
KRH37050 Soybean extracellular, vacuole 57.33 57.96
VIT_05s0077g01760.t01 Wine grape extracellular, vacuole 57.33 57.58
VIT_07s0005g00890.t01 Wine grape extracellular 58.64 56.18
KRH12027 Soybean extracellular, vacuole 57.55 55.84
CDY33922 Canola extracellular 54.05 55.63
KRH02302 Soybean extracellular 54.49 55.46
KRH50791 Soybean extracellular 54.05 55.01
Bra037429.1-P Field mustard extracellular 53.39 54.95
KRH69264 Soybean extracellular 54.49 54.73
Solyc06g009790.2.1 Tomato extracellular 54.49 54.49
PGSC0003DMT400018848 Potato extracellular 54.49 54.49
KRH31843 Soybean extracellular 54.27 54.39
CDY08036 Canola cytosol, nucleus, vacuole 44.64 54.11
GSMUA_Achr11P... Banana extracellular 64.99 54.1
PGSC0003DMT400081328 Potato extracellular 54.27 54.03
AT3G16850.1 Thale cress vacuole 53.61 53.85
AT3G06770.5 Thale cress extracellular 52.52 53.69
AT5G49215.1 Thale cress extracellular, vacuole 52.74 53.67
CDX74085 Canola cytoskeleton, cytosol, vacuole 44.42 53.42
Bra022182.1-P Field mustard extracellular, golgi 52.3 52.76
CDX92101 Canola extracellular, golgi 52.52 52.75
Bra020656.1-P Field mustard extracellular, plasma membrane 54.05 52.55
CDX95899 Canola extracellular 52.08 52.54
CDY56436 Canola extracellular, vacuole 54.27 52.32
Solyc09g075460.2.1 Tomato extracellular 54.7 52.08
CDY54633 Canola extracellular 50.98 52.01
VIT_05s0077g01740.t01 Wine grape nucleus 26.7 51.69
CDX82390 Canola extracellular 50.77 51.67
Bra001642.1-P Field mustard vacuole 50.98 51.66
Bra001215.1-P Field mustard extracellular 50.55 51.45
KRG96478 Soybean endoplasmic reticulum, extracellular 54.05 51.24
CDY05643 Canola extracellular, plasma membrane, plastid 53.39 51.05
KRH68221 Soybean extracellular 54.49 50.1
CDX86247 Canola plasma membrane, plastid 54.05 49.3
TraesCS5B01G513100.1 Wheat extracellular 50.33 48.32
TraesCS3B01G253000.1 Wheat extracellular 42.23 42.89
GSMUA_Achr11P... Banana cytosol 61.49 42.45
TraesCS7B01G224700.1 Wheat plastid 42.67 40.21
TraesCS6B01G371200.2 Wheat mitochondrion 40.92 37.78
TraesCS4B01G344700.1 Wheat extracellular 39.82 37.45
TraesCS5B01G210900.1 Wheat plastid 38.29 32.96
TraesCS5B01G263700.2 Wheat extracellular, plasma membrane 19.91 19.7
Protein Annotations
EnsemblPlants:TraesCS4B01G144700.2EnsemblPlantsGene:TraesCS4B01G144700Gene3D:2.160.20.10GO:GO:0003674GO:GO:0003824GO:GO:0004650
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_28InterPro:IPR012334
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulencePANTHER:PTHR31339PANTHER:PTHR31339:SF11PFAM:PF00295SignalP:SignalP-noTM
SUPFAM:SSF51126MapMan:50.3.2::::
Description
No Description!
Coordinates
chr4B:-:195461426..195464762
Molecular Weight (calculated)
49800.9 Da
IEP (calculated)
5.484
GRAVY (calculated)
0.003
Length
457 amino acids
Sequence
(BLAST)
001: MKRLWRLQVV LSWVLAVVLG SVHGHVRRQW GEQVPRESRP HSVTITEFGA VGDGRTLNTL PFQNAVFYAR SFADKGGAQL YVPKGRWLTG SFNLTSHLTL
101: FLEKDAIIMG AEESSQWPIV EPLPSYGQGL DLPGPRHRSL INGYNLTDVV ITGNNGLIDG QGSVWWNWLR SHELNHSRPH LVEFLYSEEI VISNLTFLNS
201: PAWSIHPMYC SNVKVHNVTI KTLLDAPLTD GIVPDSCLNV CIEDSTISVS HEAISVKSGW DKYGISIGRP TSDIHISRVD LQASSGAALA FGSEMSGGIS
301: CIHVDHLRIH GSDKGFSFKT TPDRGGYIKE VVISDVEIDG IRVAIEFIGN LSSHPDDDFD PSELPVIDQI TLKNMVGTNI SVAGVLSGID GDPFTAICLS
401: NLSFSITDSA HSSPWSCSNV SGYSESVFPE PCSELYAPFS NSSICFSLPS YSALAVA
Best Arabidopsis Sequence Match ( AT3G16850.1 )
(BLAST)
001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.