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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92101 Canola extracellular, golgi 96.47 96.04
CDX82390 Canola extracellular 87.42 88.2
CDY54633 Canola extracellular 87.2 88.17
AT3G16850.1 Thale cress vacuole 85.65 85.27
CDY33922 Canola extracellular 59.6 60.81
CDY08036 Canola cytosol, nucleus, vacuole 50.11 60.21
CDX74085 Canola cytoskeleton, cytosol, vacuole 50.33 60.0
VIT_05s0077g01760.t01 Wine grape extracellular, vacuole 60.04 59.78
KRH37050 Soybean extracellular, vacuole 58.94 59.07
KRH50791 Soybean extracellular 58.06 58.57
KRH02302 Soybean extracellular 57.84 58.35
CDY56436 Canola extracellular, vacuole 60.26 57.59
CDY05643 Canola extracellular, plasma membrane, plastid 60.04 56.9
KRH12027 Soybean extracellular, vacuole 58.94 56.69
PGSC0003DMT400018848 Potato extracellular 56.73 56.24
GSMUA_Achr5P00100_001 Banana cytosol, extracellular, plastid 52.32 56.16
Os12t0554800-01 Rice cytosol, extracellular 52.54 56.13
PGSC0003DMT400081328 Potato extracellular 56.73 55.99
Solyc06g009790.2.1 Tomato extracellular 56.29 55.8
Zm00001d023813_P001 Maize extracellular, vacuole 56.29 55.31
TraesCS5B01G097100.2 Wheat extracellular 53.64 54.12
TraesCS5D01G102900.1 Wheat unclear 53.2 53.67
Solyc09g075460.2.1 Tomato extracellular 56.73 53.54
CDX86247 Canola plasma membrane, plastid 59.16 53.49
Os11t0658800-01 Rice extracellular 52.76 53.23
KXG29050 Sorghum extracellular 52.98 53.22
TraesCS4D01G146700.1 Wheat extracellular, golgi, vacuole 52.98 52.52
TraesCS4B01G144700.2 Wheat extracellular, golgi, vacuole 52.54 52.08
TraesCS4A01G168800.1 Wheat extracellular, golgi, vacuole 52.1 51.64
TraesCS5A01G090800.2 Wheat extracellular, golgi, mitochondrion, plastid 53.42 51.05
VIT_05s0077g01740.t01 Wine grape nucleus 26.27 50.42
GSMUA_Achr11P... Banana extracellular, vacuole 48.34 49.21
CDY69951 Canola cytosol 13.69 49.21
HORVU5Hr1G023800.7 Barley plastid 53.86 47.56
Zm00001d048696_P001 Maize extracellular 51.66 47.37
CDY25090 Canola extracellular, golgi 47.02 46.51
CDX67875 Canola extracellular, golgi 47.02 46.51
CDY03516 Canola extracellular, vacuole 45.03 45.95
CDY47619 Canola extracellular, vacuole 45.03 45.95
CDX94222 Canola extracellular 45.47 45.68
CDY11403 Canola extracellular, plasma membrane 46.36 45.65
CDY10970 Canola extracellular, vacuole 45.25 45.45
CDY13383 Canola extracellular 44.37 45.17
CDX76617 Canola extracellular, plasma membrane 45.7 45.0
CDX67513 Canola extracellular 44.37 44.97
GSMUA_Achr11P... Banana extracellular 52.98 43.72
CDX75352 Canola extracellular 44.81 43.01
CDX68976 Canola extracellular 44.37 42.68
CDX71719 Canola mitochondrion 15.23 42.07
CDY46115 Canola extracellular 43.71 41.86
CDX72404 Canola extracellular 43.49 41.65
CDY05885 Canola extracellular 42.16 41.16
CDY65355 Canola extracellular 42.38 40.68
CDY05907 Canola cytosol 39.07 40.41
CDY48913 Canola extracellular 41.72 40.13
CDY70893 Canola cytosol 31.13 39.39
CDY10897 Canola cytosol, extracellular, peroxisome 20.75 39.33
CDY20264 Canola extracellular 41.28 39.12
CDY39678 Canola extracellular 41.06 38.91
CDY08113 Canola extracellular 39.07 38.82
CDY08095 Canola extracellular, plasma membrane 41.94 38.38
CDY44105 Canola cytosol, nucleus, plasma membrane 37.97 38.05
CDY69255 Canola cytosol 31.57 38.03
GSMUA_Achr11P... Banana cytosol 52.32 35.8
CDX83782 Canola extracellular, golgi, plastid 39.29 35.11
CDY27797 Canola extracellular, mitochondrion, plastid 38.63 34.93
CDX96676 Canola extracellular, golgi, plastid 39.07 34.91
CDY41934 Canola extracellular, mitochondrion, plastid 38.63 34.86
CDY53228 Canola extracellular 8.17 33.04
CDY10898 Canola cytosol 3.31 29.41
CDY10899 Canola cytosol 4.42 20.83
CDY11375 Canola mitochondrion 22.96 20.51
CDY12962 Canola extracellular, plasma membrane, vacuole 21.19 20.08
CDY02392 Canola extracellular, plasma membrane, vacuole 21.19 20.08
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078E5M1EnsemblPlants:CDX95899ProteinID:CDX95899ProteinID:CDX95899.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00101897001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF15InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EE6CC6:
Description
BnaC05g36500D
Coordinates
chrLK031891:-:1253565..1256351
Molecular Weight (calculated)
48894.0 Da
IEP (calculated)
6.443
GRAVY (calculated)
0.011
Length
453 amino acids
Sequence
(BLAST)
001: MQVALVWLLA FTNLLLIKVE SNNAVCKKTF NLDPRPHSVS ILEFGAVGDG KSLNTIAFQN AIFYLKSFAD KGGAQLYVPP GKWLTGSFNL TSHLTLFLEK
101: GATILASPDP SHWDIVSPLP SYGRGIELPG KRYRSLINGD NLLDVVITGD NGTFDGQGAA WWKWLESGTL NYSRPHIIEF VSSKNILISN LTFLNAPSVN
201: IHPVYCSHVH IKKVLIETSV DSPYVLGVVP DSSDNVCIED STINVGHDTV SLKSGWDQYG INYGRPTTTV HIRNLVLKSP TGAGISFGSE MSSGISDITV
301: ERLTIHSSRV GVAFRTTRGR GGYIRNITIS GVVLSGVDTA IVADGHTGAH ADDKYDRDAL PVVTRIVLRN FTGDGIGLAG NFTGIGESPF TSICLKDIHL
401: QTSSESWLCS NVSGYAEDVS PEPCKELVSF PSSCLAGGRI YGGETAAESY YSW
Best Arabidopsis Sequence Match ( AT3G16850.1 )
(BLAST)
001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.