Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67875 | Canola | extracellular, golgi | 98.47 | 98.47 |
| AT3G62110.1 | Thale cress | vacuole | 91.92 | 89.38 |
| CDY11403 | Canola | extracellular, plasma membrane | 88.43 | 88.04 |
| CDX76617 | Canola | extracellular, plasma membrane | 87.99 | 87.61 |
| VIT_07s0005g02590.t01 | Wine grape | extracellular, vacuole | 67.9 | 66.74 |
| KRH33649 | Soybean | nucleus | 66.59 | 65.73 |
| KRH69147 | Soybean | nucleus | 66.38 | 65.52 |
| KRG96607 | Soybean | extracellular | 65.5 | 64.1 |
| KRH68340 | Soybean | nucleus | 65.28 | 63.89 |
| GSMUA_Achr8P06180_001 | Banana | extracellular | 54.37 | 63.36 |
| GSMUA_AchrUn_... | Banana | extracellular | 54.15 | 63.1 |
| TraesCS4A01G358700.1 | Wheat | extracellular | 59.39 | 60.58 |
| EER90587 | Sorghum | extracellular | 61.35 | 59.16 |
| Os03t0833800-01 | Rice | extracellular | 61.14 | 58.82 |
| TraesCS5B01G513100.1 | Wheat | extracellular | 60.26 | 57.98 |
| HORVU5Hr1G117470.3 | Barley | extracellular | 59.83 | 57.56 |
| EER96131 | Sorghum | extracellular, mitochondrion | 61.35 | 56.31 |
| Os07t0245200-01 | Rice | plasma membrane | 54.15 | 55.61 |
| Zm00001d019282_P001 | Maize | mitochondrion | 60.7 | 54.72 |
| Zm00001d034727_P003 | Maize | plastid | 60.7 | 54.19 |
| CDY69951 | Canola | cytosol | 14.85 | 53.97 |
| TraesCS5D01G513600.1 | Wheat | plastid | 60.04 | 51.79 |
| CDX71719 | Canola | mitochondrion | 17.9 | 50.0 |
| CDY70893 | Canola | cytosol | 37.55 | 48.04 |
| CDY47619 | Canola | extracellular, vacuole | 46.51 | 47.97 |
| CDY03516 | Canola | extracellular, vacuole | 46.29 | 47.75 |
| CDX92101 | Canola | extracellular, golgi | 47.38 | 47.69 |
| CDX95899 | Canola | extracellular | 46.51 | 47.02 |
| CDX94222 | Canola | extracellular | 45.85 | 46.56 |
| CDX82390 | Canola | extracellular | 45.63 | 46.55 |
| CDY54633 | Canola | extracellular | 45.41 | 46.43 |
| CDX74085 | Canola | cytoskeleton, cytosol, vacuole | 38.43 | 46.32 |
| CDX75352 | Canola | extracellular | 47.6 | 46.19 |
| CDY33922 | Canola | extracellular | 44.76 | 46.17 |
| CDY08036 | Canola | cytosol, nucleus, vacuole | 37.99 | 46.15 |
| CDY10970 | Canola | extracellular, vacuole | 45.41 | 46.12 |
| CDY69255 | Canola | cytosol | 37.77 | 46.01 |
| CDX68976 | Canola | extracellular | 47.16 | 45.86 |
| CDX67513 | Canola | extracellular | 44.54 | 45.64 |
| CDY46115 | Canola | extracellular | 46.72 | 45.24 |
| CDX72404 | Canola | extracellular | 46.72 | 45.24 |
| CDY13383 | Canola | extracellular | 43.67 | 44.94 |
| CDY05643 | Canola | extracellular, plasma membrane, plastid | 45.85 | 43.93 |
| CDY56436 | Canola | extracellular, vacuole | 45.2 | 43.67 |
| CDY65355 | Canola | extracellular | 44.54 | 43.22 |
| CDY44105 | Canola | cytosol, nucleus, plasma membrane | 42.58 | 43.14 |
| CDY10898 | Canola | cytosol | 4.8 | 43.14 |
| CDY48913 | Canola | extracellular | 44.32 | 43.1 |
| CDY05907 | Canola | cytosol | 39.96 | 41.78 |
| CDY08113 | Canola | extracellular | 41.05 | 41.23 |
| CDY05885 | Canola | extracellular | 41.7 | 41.16 |
| CDY53228 | Canola | extracellular | 10.04 | 41.07 |
| CDX86247 | Canola | plasma membrane, plastid | 44.76 | 40.92 |
| CDY39678 | Canola | extracellular | 41.48 | 39.75 |
| CDY10897 | Canola | cytosol, extracellular, peroxisome | 20.74 | 39.75 |
| CDY08095 | Canola | extracellular, plasma membrane | 42.79 | 39.6 |
| CDY20264 | Canola | extracellular | 41.27 | 39.54 |
| CDY27797 | Canola | extracellular, mitochondrion, plastid | 39.08 | 35.73 |
| CDY41934 | Canola | extracellular, mitochondrion, plastid | 39.08 | 35.66 |
| CDX96676 | Canola | extracellular, golgi, plastid | 39.3 | 35.5 |
| CDX83782 | Canola | extracellular, golgi, plastid | 39.3 | 35.5 |
| CDY10899 | Canola | cytosol | 5.9 | 28.12 |
| CDY11375 | Canola | mitochondrion | 24.89 | 22.49 |
| CDY02392 | Canola | extracellular, plasma membrane, vacuole | 22.71 | 21.76 |
| CDY12962 | Canola | extracellular, plasma membrane, vacuole | 22.49 | 21.55 |
Protein Annotations
| Gene3D:2.160.20.10 | MapMan:50.3.2 | GO:A0A078GF53 | UniProt:A0A078GF53 | EnsemblPlants:CDY25090 | ProteinID:CDY25090 |
| ProteinID:CDY25090.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0071555 | EnsemblPlantsGene:GSBRNA2T00028948001 | InterPro:Glyco_hydro_28 | InterPro:IPR012334 | PFAM:PF00295 |
| PFAM:PF12708 | PANTHER:PTHR31339 | PANTHER:PTHR31339:SF9 | InterPro:PbH1 | InterPro:Pectate_lyase_SF_prot | InterPro:Pectin_lyas_fold |
| InterPro:Pectin_lyase_fold/virulence | SMART:SM00710 | SUPFAM:SSF51126 | TMHMM:TMhelix | UniParc:UPI0004EDBE16 | : |
Description
BnaC06g18320DBnaC06g18320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF53]
Coordinates
chrLK032168:-:371060..373975
Molecular Weight (calculated)
50811.0 Da
IEP (calculated)
6.445
GRAVY (calculated)
-0.198
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRSFLLWYV LLVQAFFYGA WYSVGGSLHC EYSNSVILHR PHSVSITEFG AVGDGVTLNT KAFQNALFYL NSFSDKGGAK LFVPAGQWLT GSFDLISHLT
101: SENWPVVDPL PSYGRGRELP GRRHRSLIYG QNLTDVVITG ENGTIDGQGS VWWDWFRNGE LNYTRPHIVE LINTTGLIIS NLTFLNSPFW NIHPVYCRDV
201: LVKNLTILAP LDSPNTDGVD PDSSTNVCIE DCYIVTGDDL VSIKSGWDEY GISYARPSSK IKINRVTGQT TSSSGIAIGS EMSGGVSDIY IKDLHLFNSN
301: TGIRIKTSPG RGGYVRNVHV SNVKFHNVQK AIRFTGKYGE HPDENFDPKA LPVIEKITFE NVNGEGIGVA GLLEGIEGDE FKNICFLNVT LIVKKNSKKA
401: PWKCSHVRGY SQWVSPEITC DSFGENIFPE HSSDCFGLSE NDLEKSSGLS RSPWLLSW
101: SENWPVVDPL PSYGRGRELP GRRHRSLIYG QNLTDVVITG ENGTIDGQGS VWWDWFRNGE LNYTRPHIVE LINTTGLIIS NLTFLNSPFW NIHPVYCRDV
201: LVKNLTILAP LDSPNTDGVD PDSSTNVCIE DCYIVTGDDL VSIKSGWDEY GISYARPSSK IKINRVTGQT TSSSGIAIGS EMSGGVSDIY IKDLHLFNSN
301: TGIRIKTSPG RGGYVRNVHV SNVKFHNVQK AIRFTGKYGE HPDENFDPKA LPVIEKITFE NVNGEGIGVA GLLEGIEGDE FKNICFLNVT LIVKKNSKKA
401: PWKCSHVRGY SQWVSPEITC DSFGENIFPE HSSDCFGLSE NDLEKSSGLS RSPWLLSW
001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W
Arabidopsis Description
AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.