Factsheet for TraesCS4A01G358700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G513100.1	Wheat	extracellular	96.21	90.76
HORVU5Hr1G117470.3	Barley	extracellular	92.87	87.61
Os03t0833800-01	Rice	extracellular	87.31	82.35
TraesCS5D01G513600.1	Wheat	plastid	95.77	80.98
EER90587	Sorghum	extracellular	84.86	80.21
Zm00001d034727_P003	Maize	plastid	84.41	73.88
GSMUA_Achr8P06180_001	Banana	extracellular	62.14	70.99
GSMUA_AchrUn_...	Banana	extracellular	60.36	68.96
VIT_07s0005g02590.t01	Wine grape	extracellular, vacuole	66.59	64.16
KRH69147	Soybean	nucleus	64.37	62.28
KRG96607	Soybean	extracellular	64.59	61.97
KRH33649	Soybean	nucleus	63.92	61.85
KRH68340	Soybean	nucleus	63.92	61.32
AT3G62110.1	Thale cress	vacuole	63.03	60.08
CDY25090	Canola	extracellular, golgi	60.58	59.39
Bra003485.1-P	Field mustard	extracellular, golgi	60.36	59.17
CDX67875	Canola	extracellular, golgi	60.36	59.17
CDY11403	Canola	extracellular, plasma membrane	59.47	58.04
Bra007662.1-P	Field mustard	extracellular, plasma membrane	59.47	58.04
CDX76617	Canola	extracellular, plasma membrane	58.35	56.96
TraesCS4A01G168800.1	Wheat	extracellular, golgi, vacuole	51.45	50.55
TraesCS5A01G090800.2	Wheat	extracellular, golgi, mitochondrion, plastid	51.0	48.31
TraesCS5A01G513600.1	Wheat	extracellular	45.66	45.45
TraesCS7A01G323800.3	Wheat	plastid	48.78	45.15
TraesCS6A01G340000.1	Wheat	mitochondrion	44.77	40.61
TraesCS7A01G019400.1	Wheat	extracellular, plastid, vacuole	45.43	39.16
TraesCS7A01G019900.1	Wheat	cytosol	22.05	36.94
TraesCS7A01G019500.1	Wheat	cytosol	21.83	36.57
TraesCS5A01G212900.1	Wheat	plastid	42.09	35.59
TraesCS3A01G393600.1	Wheat	extracellular	23.39	23.13
TraesCS5A01G264400.2	Wheat	unclear	22.72	22.32
TraesCS7A01G019700.1	Wheat	cytosol	6.01	21.95

Protein Annotations

EnsemblPlants:TraesCS4A01G358700.1	EnsemblPlantsGene:TraesCS4A01G358700	Gene3D:2.160.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_28	InterPro:IPR012334
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	PANTHER:PTHR31339	PANTHER:PTHR31339:SF20	PFAM:PF00295
SEG:seg	SignalP:SignalP-noTM	SMART:SM00710	SUPFAM:SSF51126	MapMan:50.3.2	:

Description

No Description!

Coordinates

chr4A:+:631921291..631924636

Molecular Weight (calculated)

48493.4 Da

IEP (calculated)

6.097

GRAVY (calculated)

0.033

Length

449 amino acids

Sequence
(BLAST)

001: MGRSASVFQA LLVFLITIIE TQWSSVSGMY CADMASTVYR PHSVTITEFG AVGDGVTLNT KAFQNAIFYL NSFADKGGAQ LFVPAGRWLT GGFSLISHLT
101: LSLDKDAVII GSPHSSDWPV IDPLPSYGRG RELPGGRHQS LIFGSHLTDV IITGANGTID GQGAIWWDWF HNNTLNYTRP HLVELMYSTN VVISNLTFKN
201: SPFWNIHPVY CSQVIVEHVT ILAPLNSPNT DGINPDSSTN VCISHCYVRN GDDVIVIKSG WDEYGISFAQ PSSNISISNI TGETGGGAGI AIGSEMSGGI
301: SEVRAEGLRI VNSLHGIRIK TAPGRGGYVR NVYIANVSMH NVSMAIRING NYGEHPDNNY DRNALPIISN ITIQNVVGVD VGVAGILEGI EGDNFSSICI
401: SNVSLSVQSR HPWNCSLIQG YSNSVTPESC EQLRTDCERH RSAMTVAVL

Best Arabidopsis Sequence Match ( AT3G62110.2 )
(BLAST)

001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W

Arabidopsis Description

AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.