CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007662.1-P	Field mustard	extracellular, plasma membrane	98.91	98.91
CDX76617	Canola	extracellular, plasma membrane	96.52	96.52
CDX67875	Canola	extracellular, golgi	88.7	89.08
CDY25090	Canola	extracellular, golgi	88.04	88.43
AT3G62110.1	Thale cress	vacuole	90.22	88.11
VIT_07s0005g02590.t01	Wine grape	extracellular, vacuole	66.09	65.24
KRH33649	Soybean	nucleus	64.78	64.22
KRH69147	Soybean	nucleus	64.57	64.01
KRG96607	Soybean	extracellular	64.57	63.46
KRH68340	Soybean	nucleus	64.13	63.03
GSMUA_Achr8P06180_001	Banana	extracellular	52.83	61.83
GSMUA_AchrUn_...	Banana	extracellular	52.39	61.32
TraesCS4A01G358700.1	Wheat	extracellular	58.04	59.47
Os03t0833800-01	Rice	extracellular	59.78	57.77
EER90587	Sorghum	extracellular	59.35	57.47
CDY69951	Canola	cytosol	15.65	57.14
TraesCS5B01G513100.1	Wheat	extracellular	58.7	56.72
HORVU5Hr1G117470.3	Barley	extracellular	58.04	56.09
EER96131	Sorghum	extracellular, mitochondrion	60.0	55.31
Os07t0245200-01	Rice	plasma membrane	51.96	53.59
Zm00001d019282_P001	Maize	mitochondrion	58.91	53.35
Zm00001d034727_P003	Maize	plastid	58.91	52.83
TraesCS5D01G513600.1	Wheat	plastid	58.48	50.66
CDX71719	Canola	mitochondrion	17.17	48.17
CDX92101	Canola	extracellular, golgi	46.3	46.81
CDY70893	Canola	cytosol	36.3	46.65
CDX95899	Canola	extracellular	45.65	46.36
CDX82390	Canola	extracellular	45.22	46.33
CDY54633	Canola	extracellular	45.0	46.21
CDX75352	Canola	extracellular	47.39	46.19
CDY03516	Canola	extracellular, vacuole	44.35	45.95
CDY47619	Canola	extracellular, vacuole	44.35	45.95
CDX68976	Canola	extracellular	46.96	45.86
CDX72404	Canola	extracellular	46.96	45.67
CDY46115	Canola	extracellular	46.52	45.24
CDX94222	Canola	extracellular	44.35	45.23
CDY10898	Canola	cytosol	5.0	45.1
CDX74085	Canola	cytoskeleton, cytosol, vacuole	37.17	45.0
CDX67513	Canola	extracellular	43.7	44.97
CDY08036	Canola	cytosol, nucleus, vacuole	36.74	44.83
CDY33922	Canola	extracellular	43.26	44.82
CDY10970	Canola	extracellular, vacuole	43.91	44.79
CDY69255	Canola	cytosol	36.52	44.68
CDY53228	Canola	extracellular	10.87	44.64
CDY13383	Canola	extracellular	43.04	44.49
CDY44105	Canola	cytosol, nucleus, plasma membrane	42.39	43.14
CDY48913	Canola	extracellular	44.13	43.1
CDY65355	Canola	extracellular	44.13	43.01
CDY05907	Canola	cytosol	40.87	42.92
CDY05643	Canola	extracellular, plasma membrane, plastid	44.57	42.89
CDY56436	Canola	extracellular, vacuole	44.13	42.83
CDY08113	Canola	extracellular	41.96	42.32
CDY05885	Canola	extracellular	41.52	41.16
CDX86247	Canola	plasma membrane, plastid	43.7	40.12
CDY39678	Canola	extracellular	41.09	39.54
CDY10897	Canola	cytosol, extracellular, peroxisome	20.43	39.33
CDY20264	Canola	extracellular	40.87	39.33
CDY08095	Canola	extracellular, plasma membrane	42.17	39.19
CDY27797	Canola	extracellular, mitochondrion, plastid	38.48	35.33
CDX83782	Canola	extracellular, golgi, plastid	38.91	35.31
CDX96676	Canola	extracellular, golgi, plastid	38.91	35.31
CDY41934	Canola	extracellular, mitochondrion, plastid	38.48	35.26
CDY10899	Canola	cytosol	6.09	29.17
CDY02392	Canola	extracellular, plasma membrane, vacuole	23.48	22.59
CDY12962	Canola	extracellular, plasma membrane, vacuole	23.26	22.38
CDY11375	Canola	mitochondrion	24.13	21.89

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	GO:A0A078FH43	UniProt:A0A078FH43	EnsemblPlants:CDY11403	ProteinID:CDY11403
ProteinID:CDY11403.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	EnsemblPlantsGene:GSBRNA2T00049466001	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295
PANTHER:PTHR31339	PANTHER:PTHR31339:SF9	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710
SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0004EF02C3	:	:	:

Description

BnaA09g39690DBnaA09g39690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH43]

Coordinates

chrLK032011:-:246298..249208

Molecular Weight (calculated)

50815.9 Da

IEP (calculated)

5.930

GRAVY (calculated)

-0.163

Length

460 amino acids

Sequence
(BLAST)

001: MLVFDVGYLQ LSYVLLVHVF YSAWCSDGGS LHCEYSNSQI LHRPHSVSIT EFGAVGDGVT LNTKAFQNAL FYLNTFSDKG GAKLFVPAGQ WLTGSFDLIS
101: HLTLWLDKGA TILGSTARRE LPGRRHRSLI YGQNLTDVVI TGENGTIDGQ GSIWWDWFRN GELNYTRPHL VELMNSTGLI ISNLTFLNSP FWNIHPVYCR
201: DVVVKNLTIL APLDSPNTDG VDPDSSTNVC IEDCYIVTGD DLVSIKSGWD EYGISYARPS SKIKINRLTG QTTSSSGIAI GSEMSGGVSD IYIKDLHLFN
301: SNTGIRIKTS PGRGGYVRNV HVSNVKLDNV KKAIRFTGKY GEHPDGNFDT KALPAIEKIT FENVSGEDIG VAGLLEGIEG DEFKNICFLN VTLTVKKNSK
401: KAPWRCSNVR GYSQWVSPEI TCDSFEESIF PEHSSDCFGL SENNVETSSG LSRSPWLLFW

Best Arabidopsis Sequence Match ( AT3G62110.2 )
(BLAST)

001: MKRSFLLLYV LLVQAFYGAW CSVGESLHCE YSNLASLHRP HSVSITEFGA VGDGVTLNTK AFQNALFYLN SFSDKGGAKL FVPAGQWLTG SFDLISHLTL
101: WLDKGATILG STSSENWPVV DPLPSYGRGR ELPGRRHRSL IYGQNLTDVV ITGENGTIDG QGTVWWDWFR NGELNYTRPH LVELMNSTGL IISNLTFLNS
201: PFWNIHPVYC RDVVVKNLTI LAPLESPNTD GVDPDSSTNV CIEDCYIVTG DDLVSIKSGW DEYGISYARP SSKIKINRLT GQTTSSSGIA IGSEMSGGVS
301: EIYIKDLHLF NSNTGIRIKT SAGRGGYVRN VHILNVKLDN VKKAIRFTGK YGEHPDEKYD PKALPAIEKI TFENVNGDGI GVAGLLEGIE GDVFKNICFL
401: NVTLRVKKNS KKSPWECSNV RGYSQWVSPE ITCDSLKESI FPEHGSDCFG LSENNMEISS GLSRSPWLLS W

Arabidopsis Description

AT3g62110 [Source:UniProtKB/TrEMBL;Acc:Q9FPJ2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.