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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33922 Canola extracellular 83.33 88.96
CDX86247 Canola plasma membrane, plastid 93.25 88.22
AT5G49215.1 Thale cress extracellular, vacuole 82.07 86.64
CDY05643 Canola extracellular, plasma membrane, plastid 86.29 85.56
CDX74085 Canola cytoskeleton, cytosol, vacuole 59.28 73.95
CDY08036 Canola cytosol, nucleus, vacuole 58.44 73.47
KRH37050 Soybean extracellular, vacuole 61.81 64.82
VIT_05s0077g01760.t01 Wine grape extracellular, vacuole 61.39 63.96
KRH02302 Soybean extracellular 60.34 63.7
KRH50791 Soybean extracellular 60.34 63.7
KRH12027 Soybean extracellular, vacuole 62.24 62.63
CDX92101 Canola extracellular, golgi 58.02 60.44
CDX95899 Canola extracellular 57.59 60.26
CDY54633 Canola extracellular 56.75 60.04
CDX82390 Canola extracellular 56.33 59.47
PGSC0003DMT400081328 Potato extracellular 55.91 57.73
PGSC0003DMT400018848 Potato extracellular 55.49 57.55
GSMUA_Achr5P00100_001 Banana cytosol, extracellular, plastid 51.05 57.35
Solyc06g009790.2.1 Tomato extracellular 54.85 56.89
Os12t0554800-01 Rice cytosol, extracellular 50.42 56.37
Os11t0658800-01 Rice extracellular 52.53 55.46
TraesCS5B01G097100.2 Wheat extracellular 52.53 55.46
Solyc09g075460.2.1 Tomato extracellular 55.91 55.21
VIT_05s0077g01740.t01 Wine grape nucleus 27.43 55.08
TraesCS4D01G146700.1 Wheat extracellular, golgi, vacuole 52.95 54.92
TraesCS5D01G102900.1 Wheat unclear 51.69 54.57
KXG29050 Sorghum extracellular 51.9 54.55
TraesCS4A01G168800.1 Wheat extracellular, golgi, vacuole 52.53 54.49
TraesCS4B01G144700.2 Wheat extracellular, golgi, vacuole 52.32 54.27
Zm00001d023813_P001 Maize extracellular, vacuole 51.27 52.71
TraesCS5A01G090800.2 Wheat extracellular, golgi, mitochondrion, plastid 51.9 51.9
GSMUA_Achr11P... Banana extracellular, vacuole 47.05 50.11
Zm00001d048696_P001 Maize extracellular 51.27 49.19
HORVU5Hr1G023800.7 Barley plastid 52.11 48.15
CDX67875 Canola extracellular, golgi 43.67 45.2
CDY25090 Canola extracellular, golgi 43.67 45.2
CDY10898 Canola cytosol 4.85 45.1
CDY11403 Canola extracellular, plasma membrane 42.83 44.13
GSMUA_Achr11P... Banana extracellular 51.05 44.08
CDY69951 Canola cytosol 11.6 43.65
CDX76617 Canola extracellular, plasma membrane 42.19 43.48
CDY47619 Canola extracellular, vacuole 40.72 43.47
CDY03516 Canola extracellular, vacuole 40.72 43.47
CDX94222 Canola extracellular 40.72 42.79
CDY10970 Canola extracellular, vacuole 40.72 42.79
CDY13383 Canola extracellular 40.08 42.7
CDX67513 Canola extracellular 40.08 42.51
CDX68976 Canola extracellular 40.08 40.34
CDX75352 Canola extracellular 39.87 40.04
CDY44105 Canola cytosol, nucleus, plasma membrane 37.76 39.6
CDY65355 Canola extracellular 39.24 39.41
CDY10897 Canola cytosol, extracellular, peroxisome 19.83 39.33
CDY05907 Canola cytosol 36.29 39.27
CDX72404 Canola extracellular 39.03 39.11
CDY46115 Canola extracellular 39.03 39.11
CDY48913 Canola extracellular 38.61 38.85
CDY05885 Canola extracellular 37.97 38.79
CDY08113 Canola extracellular 37.13 38.6
CDY70893 Canola cytosol 29.11 38.55
CDY39678 Canola extracellular 38.82 38.49
CDY20264 Canola extracellular 38.61 38.28
CDY69255 Canola cytosol 29.75 37.5
GSMUA_Achr11P... Banana cytosol 52.32 37.46
CDY08095 Canola extracellular, plasma membrane 38.19 36.57
CDX71719 Canola mitochondrion 12.45 35.98
CDY53228 Canola extracellular 8.23 34.82
CDY27797 Canola extracellular, mitochondrion, plastid 35.65 33.73
CDY41934 Canola extracellular, mitochondrion, plastid 35.65 33.67
CDX96676 Canola extracellular, golgi, plastid 35.44 33.14
CDX83782 Canola extracellular, golgi, plastid 35.44 33.14
CDY12962 Canola extracellular, plasma membrane, vacuole 20.68 20.5
CDY02392 Canola extracellular, plasma membrane, vacuole 20.68 20.5
CDY11375 Canola mitochondrion 20.89 19.53
CDY10899 Canola cytosol 3.8 18.75
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078J2K2UniProt:A0A078J2K2EnsemblPlants:CDY56436ProteinID:CDY56436
ProteinID:CDY56436.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00019589001InterPro:Glyco_hydro_28InterPro:IPR012334
PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF15InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSUPFAM:SSF51126
UniParc:UPI0004EF2BD8SEG:seg::::
Description
BnaC07g49290DBnaC07g49290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2K2]
Coordinates
chrLK033490:+:17414..19711
Molecular Weight (calculated)
51545.7 Da
IEP (calculated)
5.075
GRAVY (calculated)
0.018
Length
474 amino acids
Sequence
(BLAST)
001: MPVSTCSYYV YFLSPLSFFP RDPVLSEIVF CQVALVLLLA LSGLIRSNGA GNVCDLGRRP SSRPHSVSIL EFGAVGDGKT LNTLAFQNAV FYLKSFADKG
101: GAQLYVPPGR WLTGSFNLTS HLTLFLEKDA VILASQDPSH WQAVDPLPSY GRGIDLPGKR YMSLINGYML HDVVVTGDNG TIDGQGLFWW DRFNSHSLKY
201: SRPHLVEFVS SENVIVSNLT FLNAPEYTIH SVYCSHVYIH RVTANTSPES PYTVGIVPDS SDNVCIQDST INMGYDAISL KSGWDEYGIS YARPTANVQI
301: RGVHLRAASG SSISFGSEMS GGISDVVVLD AYMHNSLSGI AFRTTKGRGG YIKEIDVSNI HMVNVGTAFL ANGSFGTHPD SGFDENAYPL VSHIRLHDIV
401: GENISIAGDF FGTEESPFTS VVLSNISLSM TNSGSPDDDS WRCLYVEGSS ESVVPEPCYE LMSFESSYGR AAAL
Best Arabidopsis Sequence Match ( AT5G49215.2 )
(BLAST)
001: MPVALVLLLT LSSVILINGR SYGVGNICDR GRRPSERPHS VKITDFGAVG DGKTLNTLAF QNAVFYLKSF ADKGGAQLYV PPGRWLTGSF NLTSHLTLFL
101: EKDAVILASQ DPSHWQVTDA LPSYGRGIDL PGKRYMSLIN GDMLHDVVVT GDNGTIDGQG LVWWDRFNSH SLEYSRPHLV EFVSAENVIV SNLTFLNAPA
201: YTIHSVYCRN LYIHRVTANT CPESPYTIGI VPDSSENVCI QESSINMGYD AISLKSGCDE YGLSYARPTA NVQIRNVYLR AASGSSISFG SEMSGGISDV
301: EVSDAHIHNS LSGIAFRTTN GRGGYIKEID ISNIHMVNVG TAFLANGSFG THPDSGFDEN AYPLVSHIRL HDIVGENIST AGYFFGTKES PFTSILLSNI
401: SLSIKNSASP ADSWQCSYVD GSSEFVVPEP CLELKSFDSY YGRAEAL
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RX04]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.