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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001642.1-P Field mustard vacuole 99.33 98.89
CDY54633 Canola extracellular 97.55 97.77
CDX95899 Canola extracellular 88.2 87.42
CDX92101 Canola extracellular, golgi 88.42 87.25
AT3G16850.1 Thale cress vacuole 85.08 83.96
VIT_05s0077g01760.t01 Wine grape extracellular, vacuole 60.58 59.78
CDX74085 Canola cytoskeleton, cytosol, vacuole 50.11 59.21
CDY08036 Canola cytosol, nucleus, vacuole 49.67 59.15
KRH37050 Soybean extracellular, vacuole 59.47 59.07
CDY33922 Canola extracellular 58.13 58.78
KRH50791 Soybean extracellular 58.57 58.57
KRH02302 Soybean extracellular 58.35 58.35
GSMUA_Achr5P00100_001 Banana cytosol, extracellular, plastid 54.12 57.58
KRH12027 Soybean extracellular, vacuole 59.69 56.9
PGSC0003DMT400018848 Potato extracellular 57.46 56.46
Solyc06g009790.2.1 Tomato extracellular 57.46 56.46
CDY56436 Canola extracellular, vacuole 59.47 56.33
PGSC0003DMT400081328 Potato extracellular 57.02 55.77
CDY05643 Canola extracellular, plasma membrane, plastid 58.8 55.23
Os12t0554800-01 Rice cytosol, extracellular 51.45 54.48
Zm00001d023813_P001 Maize extracellular, vacuole 55.01 53.58
Solyc09g075460.2.1 Tomato extracellular 57.24 53.54
VIT_05s0077g01740.t01 Wine grape nucleus 27.84 52.97
TraesCS5D01G102900.1 Wheat unclear 52.78 52.78
TraesCS5B01G097100.2 Wheat extracellular 52.78 52.78
KXG29050 Sorghum extracellular 52.56 52.33
CDX86247 Canola plasma membrane, plastid 58.35 52.3
Os11t0658800-01 Rice extracellular 51.67 51.67
TraesCS4D01G146700.1 Wheat extracellular, golgi, vacuole 52.34 51.42
TraesCS4B01G144700.2 Wheat extracellular, golgi, vacuole 51.67 50.77
TraesCS4A01G168800.1 Wheat extracellular, golgi, vacuole 51.22 50.33
TraesCS5A01G090800.2 Wheat extracellular, golgi, mitochondrion, plastid 53.01 50.21
CDY69951 Canola cytosol 14.03 50.0
GSMUA_Achr11P... Banana extracellular, vacuole 49.22 49.66
HORVU5Hr1G023800.7 Barley plastid 53.01 46.39
Zm00001d048696_P001 Maize extracellular 50.78 46.15
CDX67875 Canola extracellular, golgi 46.77 45.85
CDY25090 Canola extracellular, golgi 46.55 45.63
CDY11403 Canola extracellular, plasma membrane 46.33 45.22
CDY47619 Canola extracellular, vacuole 44.54 45.05
CDY03516 Canola extracellular, vacuole 44.54 45.05
CDX76617 Canola extracellular, plasma membrane 45.66 44.57
CDX94222 Canola extracellular 44.54 44.35
CDY10970 Canola extracellular, vacuole 44.32 44.12
CDY13383 Canola extracellular 43.43 43.82
GSMUA_Achr11P... Banana extracellular 53.45 43.72
CDX67513 Canola extracellular 43.43 43.62
CDX75352 Canola extracellular 43.65 41.53
CDY05885 Canola extracellular 42.76 41.38
CDX68976 Canola extracellular 43.21 41.19
CDY46115 Canola extracellular 43.21 41.01
CDX71719 Canola mitochondrion 14.92 40.85
CDX72404 Canola extracellular 42.98 40.8
CDY05907 Canola cytosol 39.64 40.64
CDY65355 Canola extracellular 42.54 40.47
CDY48913 Canola extracellular 41.87 39.92
CDY70893 Canola cytosol 31.63 39.66
CDY08113 Canola extracellular 40.09 39.47
CDY20264 Canola extracellular 41.65 39.12
CDY39678 Canola extracellular 41.43 38.91
CDY08095 Canola extracellular, plasma membrane 42.54 38.59
CDY10897 Canola cytosol, extracellular, peroxisome 20.49 38.49
CDY69255 Canola cytosol 32.07 38.3
CDY44105 Canola cytosol, nucleus, plasma membrane 38.53 38.27
GSMUA_Achr11P... Banana cytosol 52.56 35.65
CDX83782 Canola extracellular, golgi, plastid 38.98 34.52
CDX96676 Canola extracellular, golgi, plastid 38.75 34.32
CDY27797 Canola extracellular, mitochondrion, plastid 37.64 33.73
CDY41934 Canola extracellular, mitochondrion, plastid 37.64 33.67
CDY10898 Canola cytosol 3.56 31.37
CDY53228 Canola extracellular 7.8 31.25
CDY10899 Canola cytosol 4.9 22.92
CDY02392 Canola extracellular, plasma membrane, vacuole 22.27 20.92
CDY12962 Canola extracellular, plasma membrane, vacuole 22.27 20.92
CDY11375 Canola mitochondrion 23.61 20.91
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078CZW8EnsemblPlants:CDX82390ProteinID:CDX82390ProteinID:CDX82390.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00137512001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31339PANTHER:PTHR31339:SF15InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EE7022:
Description
BnaA03g34310D
Coordinates
chrLK031828:-:948958..951526
Molecular Weight (calculated)
48721.4 Da
IEP (calculated)
5.682
GRAVY (calculated)
-0.028
Length
449 amino acids
Sequence
(BLAST)
001: MQVALVWLLA FTNVLLIRGE SNDATICKDH FMLDPRPHSV SILEFGAVGD GKYLNTLAFQ NAIFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD QSHWDTVSSL PSYGRGKRYR SLINGDNLLD VVITGDNGTF DGQGAVWWEW FESGTLNYSR PHIIELVSSK NILISNLTFL NAPSVNIHPV
201: YCSHVHIRKV LIETTVDSPY VLGVVPDSSD NVCIEDSTIN VGHDTISLKS GWDQYGINYN RPTTNVHLRN LSLKSPTGAG ISFGSEMSGG ISDVTVELLT
301: IQSSHVGVAF RTTRGRGGYI RNITISDVIL SRVDTAIVAD GHTGSHADDK YDRDALPVVT RVLMRNFTGE GIGLAGKFTG IGESPFTSIC LSDIHLQTSS
401: ESWVCSNVSG FSDDVSPEPC QELMSSPSSC FAGGGIYGVD TAARGYYSW
Best Arabidopsis Sequence Match ( AT3G16850.1 )
(BLAST)
001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.