CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048696_P001	Maize	extracellular	90.02	82.19
TraesCS4D01G146700.1	Wheat	extracellular, golgi, vacuole	79.82	78.77
TraesCS4B01G144700.2	Wheat	extracellular, golgi, vacuole	79.6	78.56
TraesCS4A01G168800.1	Wheat	extracellular, golgi, vacuole	79.38	78.34
Os11t0658800-01	Rice	extracellular	77.83	78.17
GSMUA_Achr5P00100_001	Banana	cytosol, extracellular, plastid	63.19	67.54
GSMUA_Achr11P...	Banana	extracellular, vacuole	58.31	59.1
KRH37050	Soybean	extracellular, vacuole	57.87	57.74
VIT_05s0077g01760.t01	Wine grape	extracellular, vacuole	57.43	56.92
CDY33922	Canola	extracellular	54.55	55.41
VIT_07s0005g00890.t01	Wine grape	extracellular	58.54	55.35
KRH12027	Soybean	extracellular, vacuole	57.65	55.2
GSMUA_Achr11P...	Banana	extracellular	67.18	55.19
KRH02302	Soybean	extracellular	54.77	55.01
KRH31843	Soybean	extracellular	55.43	54.82
KRH50791	Soybean	extracellular	54.55	54.79
KRH69264	Soybean	extracellular	55.21	54.73
AT3G16850.1	Thale cress	vacuole	54.99	54.51
Bra037429.1-P	Field mustard	extracellular	53.66	54.5
PGSC0003DMT400018848	Potato	extracellular	55.21	54.49
Solyc06g009790.2.1	Tomato	extracellular	54.55	53.83
PGSC0003DMT400081328	Potato	extracellular	54.55	53.59
Bra022182.1-P	Field mustard	extracellular, golgi	53.66	53.42
CDX92101	Canola	extracellular, golgi	53.88	53.41
CDY08036	Canola	cytosol, nucleus, vacuole	44.57	53.32
AT3G06770.5	Thale cress	extracellular	52.77	53.24
CDX74085	Canola	cytoskeleton, cytosol, vacuole	44.79	53.16
CDY54633	Canola	extracellular	52.77	53.12
CDX95899	Canola	extracellular	53.22	52.98
Bra001642.1-P	Field mustard	vacuole	52.77	52.77
AT5G49215.1	Thale cress	extracellular, vacuole	52.33	52.56
CDX82390	Canola	extracellular	52.33	52.56
KRG96478	Soybean	endoplasmic reticulum, extracellular	56.1	52.49
Bra020656.1-P	Field mustard	extracellular, plasma membrane	54.55	52.34
CDY56436	Canola	extracellular, vacuole	54.55	51.9
Solyc09g075460.2.1	Tomato	extracellular	54.99	51.67
KRH68221	Soybean	extracellular	56.54	51.31
VIT_05s0077g01740.t01	Wine grape	nucleus	26.83	51.27
Bra001215.1-P	Field mustard	extracellular	51.0	51.22
CDY05643	Canola	extracellular, plasma membrane, plastid	53.44	50.42
EER90587	Sorghum	extracellular	52.77	50.11
CDX86247	Canola	plasma membrane, plastid	54.32	48.9
EES01085	Sorghum	extracellular	47.67	48.1
EER96131	Sorghum	extracellular, mitochondrion	51.66	46.69
EES20030	Sorghum	extracellular	45.23	46.47
EES04867	Sorghum	extracellular, plasma membrane	45.45	45.76
GSMUA_Achr11P...	Banana	cytosol	64.3	43.81
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	44.12	40.04
EER95599	Sorghum	extracellular	41.02	39.96
EER89047	Sorghum	extracellular, vacuole	42.13	38.38
EES05901	Sorghum	extracellular, golgi	41.02	37.0
EER96790	Sorghum	plastid	39.02	33.98
EER99085	Sorghum	extracellular, plasma membrane	21.29	20.78

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A1B6PTQ9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334
EnsemblPlants:KXG29050	ProteinID:KXG29050	ProteinID:KXG29050.1	PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF5
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3005G204700	SUPFAM:SSF51126
SignalP:SignalP-noTM	UniParc:UPI00081AE77D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:69037246..69041201

Molecular Weight (calculated)

48353.9 Da

IEP (calculated)

4.860

GRAVY (calculated)

0.047

Length

451 amino acids

Sequence
(BLAST)

001: MKGLVVVLAL VVVVLAATTA RGELRDQAPP GSRPHSVTIT EFGAVGDGRT LNTVPFQNAV FYVRSFADKG GAQLYVPRGR WLTGSFNLTS HLTIYLEQGA
101: VIVGAKDSSQ WPIVEPLPSY GQGTDLPGPR HRSLINGYNL TDVVITGNNG VIDGQGLVWW QWLLSHELNH SRPHLLEFLY SEDIVISNLT FLNSPAWSIH
201: PVYCSNVKVH NVTIETSLDA PLTDGIVPDS CSNLCIEDST ISVSHEAISL KSGWDKYGIS FGRPTSDIHI SRVDLLSSSG AALAFGSEMS GGISDIHVNH
301: LRIHDSYKGI SFKTSPGRGG YIEEVIISEV QMENVHVGIE FTGNCSTHPD DSFDLSDLPT IDQVTMKNMV GTNISVAGVL SGIDNAPFTA ICLSNLNFSM
401: AADTGSSSWS CSNVSGYSEA VFPEPCTELR DPSSSPSICF SLSSYSAIAA A

Best Arabidopsis Sequence Match ( AT3G16850.1 )
(BLAST)

001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.