CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009717_P001	Maize	extracellular	87.93	86.55
Os05t0587000-01	Rice	extracellular	86.79	85.04
EES01085	Sorghum	extracellular	77.45	76.06
GSMUA_Achr4P08470_001	Banana	extracellular	65.38	69.83
GSMUA_Achr4P15650_001	Banana	extracellular, plasma membrane, vacuole	60.14	65.02
VIT_02s0025g01330.t01	Wine grape	extracellular	64.69	63.53
KRH45957	Soybean	extracellular	64.01	63.43
KRG99037	Soybean	nucleus	63.55	63.12
PGSC0003DMT400031687	Potato	extracellular	64.01	62.86
KRH73576	Soybean	extracellular	39.18	62.32
Bra013734.1-P	Field mustard	extracellular, vacuole	62.41	61.71
KRH14547	Soybean	extracellular	62.64	61.66
CDY03516	Canola	extracellular, vacuole	62.19	61.49
CDY47619	Canola	extracellular, vacuole	62.19	61.49
AT4G23820.1	Thale cress	extracellular, vacuole	61.5	60.81
Solyc08g082170.2.1	Tomato	nucleus	64.46	60.6
EES04867	Sorghum	extracellular, plasma membrane	61.73	60.49
CDY10970	Canola	extracellular, vacuole	61.28	59.65
Bra019264.1-P	Field mustard	extracellular, vacuole	60.82	59.2
CDX94222	Canola	extracellular	60.59	58.98
CDX67513	Canola	extracellular	58.54	57.49
Bra028511.1-P	Field mustard	extracellular	58.54	57.49
AT5G41870.1	Thale cress	extracellular	58.54	57.24
CDY13383	Canola	extracellular	57.86	57.08
EER90587	Sorghum	extracellular	48.97	45.26
KXG29050	Sorghum	extracellular	46.47	45.23
EER96131	Sorghum	extracellular, mitochondrion	50.11	44.09
EER95599	Sorghum	extracellular	46.47	44.06
KXG24195	Sorghum	endoplasmic reticulum, extracellular, plasma membrane, plastid	47.84	42.25
EER89047	Sorghum	extracellular, vacuole	45.1	40.0
EES05901	Sorghum	extracellular, golgi	43.28	38.0
EER96790	Sorghum	plastid	42.37	35.91
EER99085	Sorghum	extracellular, plasma membrane	22.1	21.0

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	EntrezGene:8066541	UniProt:C5YWL7	EnsemblPlants:EES20030	ProteinID:EES20030
ProteinID:EES20030.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31339
PANTHER:PTHR31339:SF37	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3009G250800
SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0001A893C1	RefSeq:XP_002441600.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:58582093..58584191

Molecular Weight (calculated)

46627.6 Da

IEP (calculated)

8.066

GRAVY (calculated)

0.051

Length

439 amino acids

Sequence
(BLAST)

001: MPPALRLLVA TALLLLSSSA GAQDSCWSGP APLRGAWMSV ASFGARGDGQ TLNTGAFARA VARIERRRGA RGGTLLYVPP GVWLTGPFNL TSHMTLFLAR
101: GAVIRATQDT SSWPLIDPLP SYGRGRELPG GRYMSLIHGN GLQDVFITGE NGTIDGQGSL WWDMWKKRTL PFTRPHLLEL MYSTDVVVSN VVFQDSPFWN
201: IHPVYCSNVV IANVTVLAPH DSPNTDGIDL DSSSNVCIED SYISAGDDLI SIKSGWDEYG IAFGRPSSGI TIRRITGSGP FAGFAVGSET SGGVENVLVE
301: HLNLFGMGVG IHIKTNSGRG GFIRNITVSE VTLNGARYGL RIAGDVGGHP DASYNPSVLP VVNSVTIKNV LGQNIRQAGL IRGIRNSVFS NICLSNVKLY
401: GSASIGPWKC RAVSGAALDV QPSPCTELAS TSETGFCTS

Best Arabidopsis Sequence Match ( AT4G23820.1 )
(BLAST)

001: MWRLSVSIFL FSCLFVSSSS LGDSEATCSG IVPLRYRYDK ISITDFGGVG DGRTVNTKAF RAAIYRIQHL KRRGGTLLYI PPGVYLTESF NLTSHMTLYL
101: AKGAVIRAVQ DTWNWPLIDP LPSYGRGREL PGGRYMSFIH GDGLRDVVIT GQNGTIDGQG EVWWNMWRSR TLKYTRPNLI EFKDSKEIII SNVIFQNSPF
201: WNIHPVYCSN VVIHHVTILA PQDSPNTDGI DPDSSYNVCI EDSYISTGDD LVAIKSGWDQ YGIAYGRPSS NITIRRITGS SPFAGIAIGS ETSGGIKNII
301: AEHITLSNMG VGVNIKTNIG RGGYIKNIKI SDVYVDTAKY GIKIAGDTGD HPDENYNPNA LPVVKGIHIK NVWGVNVRNA GSIQGLKGSP FTGICLSEIN
401: LHGSLNSYKT WKCSDVSGTS LKVSPWPCSE LRTTGGSNLC SSTF

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SUP5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.