Factsheet for Zm00001d009717_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES20030	Sorghum	extracellular	86.55	87.93
Os05t0587000-01	Rice	extracellular	82.29	81.92
Zm00001d011369_P001	Maize	extracellular	71.3	71.46
GSMUA_Achr4P08470_001	Banana	extracellular	61.21	66.42
GSMUA_Achr4P15650_001	Banana	extracellular, plasma membrane, vacuole	58.52	64.29
Bra013734.1-P	Field mustard	extracellular, vacuole	60.54	60.81
PGSC0003DMT400031687	Potato	extracellular	60.76	60.63
CDY03516	Canola	extracellular, vacuole	60.31	60.59
CDY47619	Canola	extracellular, vacuole	60.31	60.59
VIT_02s0025g01330.t01	Wine grape	extracellular	60.54	60.4
KRH45957	Soybean	extracellular	58.97	59.37
KRG99037	Soybean	nucleus	58.3	58.82
AT4G23820.1	Thale cress	extracellular, vacuole	58.52	58.78
Zm00001d053395_P001	Maize	extracellular	59.42	58.76
Solyc08g082170.2.1	Tomato	nucleus	60.99	58.24
CDY10970	Canola	extracellular, vacuole	58.74	58.09
KRH14547	Soybean	extracellular	57.85	57.85
Bra019264.1-P	Field mustard	extracellular, vacuole	58.3	57.65
CDX94222	Canola	extracellular	58.07	57.43
KRH73576	Soybean	extracellular	34.53	55.8
CDX67513	Canola	extracellular	54.93	54.81
Bra028511.1-P	Field mustard	extracellular	54.71	54.59
AT5G41870.1	Thale cress	extracellular	54.71	54.34
CDY13383	Canola	extracellular	54.04	54.16
Zm00001d018548_P001	Maize	cytosol	23.54	45.26
Zm00001d027441_P001	Maize	plasma membrane	45.96	44.28
Zm00001d021964_P001	Maize	cytosol	16.37	43.45
Zm00001d019282_P001	Maize	mitochondrion	48.43	42.52
Zm00001d010681_P001	Maize	cytosol	26.68	42.05
Zm00001d034990_P001	Maize	plasma membrane	46.41	41.99
Zm00001d023813_P001	Maize	extracellular, vacuole	42.83	41.43
Zm00001d034727_P003	Maize	plastid	46.86	40.74
Zm00001d035899_P001	Maize	extracellular	44.17	40.53
Zm00001d048696_P001	Maize	extracellular	43.27	39.07
Zm00001d052103_P001	Maize	plasma membrane	42.38	38.18
Zm00001d020615_P001	Maize	plastid	41.7	36.05
Zm00001d020931_P001	Maize	extracellular	23.54	22.58

Protein Annotations

EntrezGene:100283011	Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A1D6FL95	ProteinID:AQK92469.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0016829
GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF37
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM
UniParc:UPI000189D9A1	EnsemblPlantsGene:Zm00001d009717	EnsemblPlants:Zm00001d009717_P001	EnsemblPlants:Zm00001d009717_T001	SEG:seg	:

Description

Pectin lyase-like superfamily protein

Coordinates

chr8:+:77524892..77526895

Molecular Weight (calculated)

46993.0 Da

IEP (calculated)

8.015

GRAVY (calculated)

0.078

Length

446 amino acids

Sequence
(BLAST)

001: MPPTLGLLLA AAAAVLLLLL PPPPSAGAQE TCWSGPAPRR GAWMSVASFG ARGDGQTLNT GAFARAVARI ARRRGARGGT LLYVPPGVWL TGPFNLTSHM
101: TLFLARGAIV RATQDTSSWP LIDPLPSYGR GRELPGGRYM SLIHGHGLQD VFITGENGTI DGQGGVWWDM WKKRTLPFTR PHLLELMYST DVVVSNLVFQ
201: DSPFWNIHPV YCSNVVIANL TVLAPHDSPN TDGIDLDSSS NVCVEDCYIS AGDDLISIKS GWDEYGVAFG RPSSGITVRR ITGSGPFAGF AVGSETSGGV
301: EDVVAEHLSF SGVGVGVHVK TNSGRGGFIR NVTVSQVTLD GARYGLRIAG DVGGHPGASY NASLLPVIDG VAVRNVWGRN VRQAGLIRGI RDSVFSNICL
401: SNVKLYGIGS DSIGPWRCRA VSGSALDVQP SPCAELASTS GTGFCT

Best Arabidopsis Sequence Match ( AT4G23820.1 )
(BLAST)

001: MWRLSVSIFL FSCLFVSSSS LGDSEATCSG IVPLRYRYDK ISITDFGGVG DGRTVNTKAF RAAIYRIQHL KRRGGTLLYI PPGVYLTESF NLTSHMTLYL
101: AKGAVIRAVQ DTWNWPLIDP LPSYGRGREL PGGRYMSFIH GDGLRDVVIT GQNGTIDGQG EVWWNMWRSR TLKYTRPNLI EFKDSKEIII SNVIFQNSPF
201: WNIHPVYCSN VVIHHVTILA PQDSPNTDGI DPDSSYNVCI EDSYISTGDD LVAIKSGWDQ YGIAYGRPSS NITIRRITGS SPFAGIAIGS ETSGGIKNII
301: AEHITLSNMG VGVNIKTNIG RGGYIKNIKI SDVYVDTAKY GIKIAGDTGD HPDENYNPNA LPVVKGIHIK NVWGVNVRNA GSIQGLKGSP FTGICLSEIN
401: LHGSLNSYKT WKCSDVSGTS LKVSPWPCSE LRTTGGSNLC SSTF

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SUP5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.