Factsheet for Zm00001d010681_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018548_P001	Maize	cytosol	72.79	88.79
CDY69951	Canola	cytosol	26.86	60.32
Zm00001d027441_P001	Maize	plasma membrane	75.27	46.0
CDY10898	Canola	cytosol	8.13	45.1
EER95599	Sorghum	extracellular	70.67	43.2
TraesCS5A01G513600.1	Wheat	extracellular	66.08	41.46
Os03t0124900-01	Rice	extracellular	66.08	40.83
TraesCS4B01G344700.1	Wheat	extracellular	67.49	39.3
CDY70893	Canola	cytosol	46.29	36.59
Solyc01g094970.2.1	Tomato	extracellular	50.18	34.89
CDY69255	Canola	cytosol	46.29	34.84
GSMUA_Achr7P24560_001	Banana	cytosol, nucleus, vacuole	20.49	32.95
Zm00001d035899_P001	Maize	extracellular	55.48	32.3
VIT_15s0046g02000.t01	Wine grape	extracellular, vacuole	52.3	30.9
Solyc08g081480.2.1	Tomato	extracellular	52.65	30.85
KRH48075	Soybean	extracellular	52.3	30.71
PGSC0003DMT400032104	Potato	extracellular	52.3	30.64
PGSC0003DMT400055769	Potato	extracellular	51.59	30.61
KRH48076	Soybean	extracellular	51.24	30.59
Solyc05g049980.2.1	Tomato	extracellular	52.3	30.45
KRH41230	Soybean	nucleus	53.0	30.36
KRH59960	Soybean	nucleus	52.65	30.28
PGSC0003DMT400000538	Potato	extracellular	50.53	30.11
VIT_02s0025g00260.t01	Wine grape	extracellular	50.88	30.0
CDY65355	Canola	extracellular	49.47	29.66
KRH00832	Soybean	nucleus	50.53	29.55
KRH06594	Soybean	mitochondrion	51.24	29.53
KRH40394	Soybean	extracellular, nucleus	50.18	29.34
CDY48913	Canola	extracellular	48.76	29.3
Bra007609.1-P	Field mustard	extracellular	48.41	29.15
CDY44105	Canola	cytosol, nucleus, plasma membrane	46.29	28.98
Bra019299.1-P	Field mustard	extracellular, plasma membrane	47.7	27.38
AT4G23500.1	Thale cress	extracellular, plasma membrane	47.7	27.27
Bra013697.1-P	Field mustard	extracellular, plasma membrane	47.0	26.98
Zm00001d009717_P001	Maize	extracellular	42.05	26.68
PGSC0003DMT400094734	Potato	cytosol	9.89	26.67
Zm00001d019282_P001	Maize	mitochondrion	46.29	25.79
Zm00001d034990_P001	Maize	plasma membrane	44.88	25.76
Zm00001d034727_P003	Maize	plastid	46.64	25.73
Zm00001d053395_P001	Maize	extracellular	40.64	25.5
Zm00001d011369_P001	Maize	extracellular	38.87	24.72
AT3G61490.4	Thale cress	cytosol, plastid	50.53	24.28
Zm00001d023813_P001	Maize	extracellular, vacuole	38.16	23.43
Zm00001d021964_P001	Maize	cytosol	13.78	23.21
Zm00001d052103_P001	Maize	plasma membrane	39.58	22.63
Zm00001d048696_P001	Maize	extracellular	38.87	22.27
Zm00001d020615_P001	Maize	plastid	40.28	22.09
KRH33610	Soybean	plastid	7.77	12.22
Zm00001d020931_P001	Maize	extracellular	19.43	11.83
Solyc06g030520.1.1	Tomato	cytosol	3.89	9.65
PGSC0003DMT400065330	Potato	nucleus	3.89	5.37
CDY10899	Canola	cytosol	1.06	3.12

Protein Annotations

Gene3D:1.10.510.10	Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A1D6FSP6	ProteinID:AQK94583.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0004672	GO:GO:0005975	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0016787
GO:GO:0016798	GO:GO:0016829	GO:GO:0019538	InterPro:Glyco_hydro_28	InterPro:IPR012334	InterPro:Kinase-like_dom_sf
PFAM:PF00295	PFAM:PF07714	PANTHER:PTHR31339	PANTHER:PTHR31339:SF39	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SUPFAM:SSF51126	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000843FCA4	EnsemblPlantsGene:Zm00001d010681	EnsemblPlants:Zm00001d010681_P001
EnsemblPlants:Zm00001d010681_T001	:	:	:	:	:

Description

Pectin lyase-like superfamily protein

Coordinates

chr8:-:124135102..124137466

Molecular Weight (calculated)

31206.3 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.071

Length

283 amino acids

Sequence
(BLAST)

001: MAYGDRVITF EDSEKESEYG YVRKDMKHWP LIAPLPSYGR GRDEPGARYS NFIGGSNLTD VIITGKNGTI NGKGQVWWDK FHAKELKFIR GHLLELLYSE
101: NIIISNVTFV NAPYWNLHPT YCTGVTILAP VNSPNTDGID PKSSSRVKIE DCYIVSGDDC VAVKSGWDEY GIRFNMPSQH IVIQRLTSVS PTSAMIALSS
201: EMSGGIRDVR AKDSVAINTE SAIRVKTLGA IAGVLSRNEL VAAALFTLAI NHKQVDVFSF GIVLWEILTG EEPYANMHCG AII

Best Arabidopsis Sequence Match ( AT3G48950.1 )
(BLAST)

001: MIRPTFGLLV FLAIFLFPAI ESRSHRNSVT SKIEFSALNC RKHSAILTDF GAVGDGKTSN TKAFRNAISK LSQMATDGGA QLVVPPGKWL TGSFNLTSHF
101: TLFIQRGATI LASQDESEWP VIAPLPSYGK GRDGTGTGRF NSLISGTNLT DVVITGNNGT INGQGQYWWD KFKKKQFKIT RPYLIEILFS KNIQISNITL
201: IDSPSWNIHP VYCNSVIVKS VTVLAPVTVP NTDGINPDSC TNTLIEDCYI VSGDDCIAVK SGWDQYGIKF GMPTQQLSIR RLTCISPKSA GVALGSEMSG
301: GIKDVRIEDV TLTNTESAIR IKTAVGRGAY VKDIYARRIT MKTMKYVFWM SGNYGSHPDE GFDPKALPEI TNINYRDMTA ENVTMSASLD GIDKDPFTGI
401: CISNVTIALA AKAKKMQWNC TDVAGVTSRV TPEPCSLLPE KKAQAKNVDC AFPSDLIPIE SVVLKKCFL

Arabidopsis Description

Endo-polygalacturonase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SMT3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.