Factsheet for Os11t0658800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G146700.1	Wheat	extracellular, golgi, vacuole	82.41	80.96
TraesCS4B01G144700.2	Wheat	extracellular, golgi, vacuole	81.51	80.09
TraesCS4A01G168800.1	Wheat	extracellular, golgi, vacuole	80.4	78.99
KXG29050	Sorghum	extracellular	78.17	77.83
Os12t0554800-01	Rice	cytosol, extracellular	72.38	76.65
Zm00001d048696_P001	Maize	extracellular	76.84	69.84
GSMUA_Achr5P00100_001	Banana	cytosol, extracellular, plastid	63.25	67.3
KRH37050	Soybean	extracellular, vacuole	60.8	60.4
VIT_05s0077g01760.t01	Wine grape	extracellular, vacuole	59.91	59.12
GSMUA_Achr11P...	Banana	extracellular, vacuole	58.57	59.1
KRH12027	Soybean	extracellular, vacuole	60.8	57.96
VIT_07s0005g00890.t01	Wine grape	extracellular	59.91	56.39
KRH50791	Soybean	extracellular	56.35	56.35
KRH02302	Soybean	extracellular	56.35	56.35
CDY33922	Canola	extracellular	55.68	56.31
KRH69264	Soybean	extracellular	56.35	55.6
KRH31843	Soybean	extracellular	56.35	55.48
Bra037429.1-P	Field mustard	extracellular	54.79	55.41
AT3G06770.5	Thale cress	extracellular	54.79	55.03
CDY08036	Canola	cytosol, nucleus, vacuole	45.88	54.64
AT3G16850.1	Thale cress	vacuole	55.23	54.51
CDX74085	Canola	cytoskeleton, cytosol, vacuole	46.1	54.47
GSMUA_Achr11P...	Banana	extracellular	66.59	54.46
AT5G49215.1	Thale cress	extracellular, vacuole	54.12	54.12
PGSC0003DMT400018848	Potato	extracellular	55.01	54.05
Solyc06g009790.2.1	Tomato	extracellular	55.01	54.05
CDX92101	Canola	extracellular, golgi	54.12	53.41
Bra001215.1-P	Field mustard	extracellular	53.23	53.23
Bra022182.1-P	Field mustard	extracellular, golgi	53.67	53.2
Bra020656.1-P	Field mustard	extracellular, plasma membrane	55.68	53.19
PGSC0003DMT400081328	Potato	extracellular	54.12	52.94
CDX95899	Canola	extracellular	53.23	52.76
VIT_05s0077g01740.t01	Wine grape	nucleus	27.62	52.54
CDY56436	Canola	extracellular, vacuole	55.46	52.53
KRG96478	Soybean	endoplasmic reticulum, extracellular	56.35	52.49
CDY05643	Canola	extracellular, plasma membrane, plastid	55.46	52.09
Bra001642.1-P	Field mustard	vacuole	52.12	51.88
CDY54633	Canola	extracellular	51.67	51.79
CDX82390	Canola	extracellular	51.67	51.67
Os03t0833800-01	Rice	extracellular	54.12	51.05
KRH68221	Soybean	extracellular	56.35	50.91
Solyc09g075460.2.1	Tomato	extracellular	54.12	50.62
Os01t0618900-01	Rice	cytosol, extracellular	36.3	49.54
CDX86247	Canola	plasma membrane, plastid	55.01	49.3
Os07t0245200-01	Rice	plasma membrane	46.77	47.09
Os05t0587000-01	Rice	extracellular	46.1	46.21
Os02t0256100-01	Rice	extracellular	43.88	44.47
GSMUA_Achr11P...	Banana	cytosol	62.36	42.3
Os06t0106800-01	Rice	extracellular	44.1	40.82
Os03t0124900-01	Rice	extracellular	40.76	39.96
Os08t0107300-00	Rice	extracellular, mitochondrion	42.32	39.42
Os02t0781000-01	Rice	extracellular	22.72	35.79
Os09t0439400-01	Rice	plastid	38.08	32.51
Os09t0487600-01	Rice	extracellular	22.27	21.88

Protein Annotations

Gene3D:2.160.20.10	EntrezGene:4351055	MapMan:50.3.2	ProteinID:ABA95183.1	ProteinID:BAF28762.1	ProteinID:BAT15123.1
ProteinID:EEE52511.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlantsGene:Os11g0658800	EnsemblPlants:Os11t0658800-01
PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF11	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
UniProt:Q2R052	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0000681D13	RefSeq:XP_015618001.1
SEG:seg	:	:	:	:	:

Description

Pectin lyase fold/virulence factor domain containing protein. (Os11t0658800-01)

Coordinates

chr11:-:26420114..26423933

Molecular Weight (calculated)

48354.0 Da

IEP (calculated)

5.433

GRAVY (calculated)

0.065

Length

449 amino acids

Sequence
(BLAST)

001: MKRRLVVVAL VLLAVVELVH GDGWRWAPGS RPHSVTITEF GAVGDGKTLN TLPFQNAVFY ARSFADKGGA QLYVPKGRWL TGSFNLTSHL TLFLEEEAVI
101: IGTKDPSQWP IVEPLPSYGQ GLDLPGPRHR SLINGYNLSD VVITGNNGVI DGQGSVWWDW LHSHELNHSR PHIVEFLHSE EVVISNLTFL NSPAWSIHPV
201: YCSNVKVHNV TIKTSLDAPL TDGIVPDSCS NVCIEDSSIS VGHDAISLKS GWDNYGISFG RPTSDIHISR VDLQASSGAA LAIGSEMSGG ISDIHVDHIR
301: IGSSSKGISF RTTPGRGGYI AEVVVADVVM DSVHLAIEFT GNWSSHPDDH FDPSFLPVID QITLKNMEGT NISVAGVLSG IEGDPFSAIC LSNLNFSIAD
401: LAPSSAWTCS NVHGYSELVF PKPCSELHDT STNSSICFSL SSYSALAVL

Best Arabidopsis Sequence Match ( AT3G16850.1 )
(BLAST)

001: MKMPVALVWL LAFTILLISG EGNNAICKEN FKLDPRPHSV SILEFGAVGD GKTLNTIAFQ NAVFYLKSFA DKGGAQLYVP PGKWLTGSFN LTSHLTLFLE
101: KGATILASPD PSHWDVVSPL PSYGRGIELP GKRYRSLING DNLIDVVITG ENGTFDGQGA AWWEWLESGS LNYSRPHIIE FVSSKHILIS NLTFLNAPAI
201: NIHPVYCSQI HIRKVLIETS VDSPHVLGVA PDSSDNVCIE DSTINVGHDA VSLKSGWDQY GIHYGRPTTA VHIRNLRLKS PTGAGISFGS EMSGGVSDVT
301: VERLNIHSSL IGVAFRTTRG RGGYIRNITI SDVDLTSVDT AIVANGHTGS HPDDKFDRDA LPVVTHIVMR NFTGVDIGVA GNLTGIGESP FTSICLADIH
401: LQTRSEESWI CSNVSGFSDD VSPEPCQELM SSPSSCFAGG SIYEGDATAQ SYYSW

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94C86]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.