Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G019900.1 | Wheat | cytosol | 83.74 | 38.43 |
| TraesCS7A01G019500.1 | Wheat | cytosol | 83.74 | 38.43 |
| GSMUA_Achr3P27460_001 | Banana | extracellular, plastid | 52.03 | 31.84 |
| CDY10899 | Canola | cytosol | 24.39 | 31.25 |
| PGSC0003DMT400094734 | Potato | cytosol | 18.7 | 21.9 |
| TraesCSU01G066000.1 | Wheat | golgi, unclear | 93.5 | 21.86 |
| TraesCS7A01G019400.1 | Wheat | extracellular, plastid, vacuole | 86.18 | 20.35 |
| GSMUA_Achr4P05580_001 | Banana | cytosol | 51.22 | 20.19 |
| Zm00001d035899_P001 | Maize | extracellular | 65.04 | 16.46 |
| PGSC0003DMT400065330 | Potato | nucleus | 26.83 | 16.1 |
| Os06t0106800-01 | Rice | extracellular | 62.6 | 15.88 |
| Solyc06g030520.1.1 | Tomato | cytosol | 14.63 | 15.79 |
| EER89047 | Sorghum | extracellular, vacuole | 63.41 | 15.76 |
| CDY70893 | Canola | cytosol | 41.46 | 14.25 |
| CDY69255 | Canola | cytosol | 41.46 | 13.56 |
| PGSC0003DMT400032104 | Potato | extracellular | 47.15 | 12.01 |
| Bra007609.1-P | Field mustard | extracellular | 45.53 | 11.91 |
| CDY48913 | Canola | extracellular | 45.53 | 11.89 |
| Solyc08g081480.2.1 | Tomato | extracellular | 46.34 | 11.8 |
| CDY44105 | Canola | cytosol, nucleus, plasma membrane | 41.46 | 11.28 |
| VIT_15s0046g02000.t01 | Wine grape | extracellular, vacuole | 43.9 | 11.27 |
| CDY65355 | Canola | extracellular | 43.09 | 11.23 |
| KRH59960 | Soybean | nucleus | 44.72 | 11.18 |
| KRH41230 | Soybean | nucleus | 44.72 | 11.13 |
| PGSC0003DMT400055769 | Potato | extracellular | 43.09 | 11.11 |
| PGSC0003DMT400000538 | Potato | extracellular | 42.28 | 10.95 |
| AT4G23500.1 | Thale cress | extracellular, plasma membrane | 43.9 | 10.91 |
| Solyc05g049980.2.1 | Tomato | extracellular | 43.09 | 10.91 |
| VIT_02s0025g00260.t01 | Wine grape | extracellular | 41.46 | 10.62 |
| KRH48075 | Soybean | extracellular | 41.46 | 10.58 |
| Bra013697.1-P | Field mustard | extracellular, plasma membrane | 42.28 | 10.55 |
| KRH40394 | Soybean | extracellular, nucleus | 41.46 | 10.54 |
| KRH00832 | Soybean | nucleus | 41.46 | 10.54 |
| TraesCS5A01G513600.1 | Wheat | extracellular | 38.21 | 10.42 |
| KRH06594 | Soybean | mitochondrion | 41.46 | 10.39 |
| Bra019299.1-P | Field mustard | extracellular, plasma membrane | 41.46 | 10.34 |
| KRH48076 | Soybean | extracellular | 39.02 | 10.13 |
| AT3G61490.4 | Thale cress | cytosol, plastid | 43.9 | 9.17 |
| CDY10898 | Canola | cytosol | 3.25 | 7.84 |
| TraesCS4A01G168800.1 | Wheat | extracellular, golgi, vacuole | 25.2 | 6.78 |
| TraesCS5A01G090800.2 | Wheat | extracellular, golgi, mitochondrion, plastid | 24.39 | 6.33 |
| TraesCS4A01G358700.1 | Wheat | extracellular | 21.95 | 6.01 |
| Solyc01g094970.2.1 | Tomato | extracellular | 18.7 | 5.65 |
| TraesCS7A01G323800.3 | Wheat | plastid | 21.95 | 5.57 |
| KRH33610 | Soybean | plastid | 8.13 | 5.56 |
| TraesCS6A01G340000.1 | Wheat | mitochondrion | 21.95 | 5.45 |
| TraesCS5A01G212900.1 | Wheat | plastid | 22.76 | 5.27 |
| TraesCS3A01G393600.1 | Wheat | extracellular | 11.38 | 3.08 |
| TraesCS5A01G264400.2 | Wheat | unclear | 11.38 | 3.06 |
| CDY69951 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G019700.1 | EnsemblPlantsGene:TraesCS7A01G019700 | InterPro:Pectin_lyase_fold/virulence | PANTHER:PTHR31339 | PANTHER:PTHR31339:SF7 | SUPFAM:SSF51126 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:8062903..8063325
Molecular Weight (calculated)
13095.4 Da
IEP (calculated)
4.407
GRAVY (calculated)
-0.172
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLDGMERVF WMTGDYKSHP DDGYNKTAVP VVENISYQDG APFKGICMAN VTTEMTKERK VSWNCADVEG VSAGVTPAPC APLQGTHAGS CLFPTDTLAV
101: DQIAVQQCSY SIAPAASSVT GTE
101: DQIAVQQCSY SIAPAASSVT GTE
001: MTSLSTAGYL LLLLLLPISY DGGFIGAADA EHDLRATDLH NHRHRRHRNH HRGEEFEYSA ISCRAYSASL DEFGAVGDGV TSNTAAFRDA VSQLSRFADY
101: GGSLLFVPAG RWLTGNFNLT SHFTLFLHRD AVILASQEES DYEVIEPLPS YGRGRDTDGG RFISLLFGSN LTDVVITGEN GTIDGQGEPW WGKFKRGELK
201: YTRPYLIEIM HSDGIQISNL TFLNSPSWHI HPVYSSNIYI QGLTILAPVT VPNTDGINPD SCTNTRIEDC YIVSGDDCIA VKSGWDQYGI NYGMPTKQLL
301: IRRLTCISPD SAVIALGSEM SGGIEDVRAE DIVAINSESG IRIKTAIGRG GYVKDVYVRG MTMMTMKYVF WMTGSYGSHP DDHYDPKALP VIQNINYQDM
401: VAENVTMPAQ LAGISGDQFT GICISNVTIT LSKKPKKVLW NCTDVSGYTS GVTPQPCQLL PEKQPGTVVP CNFPEDPIPI DEVKLQRCYS RRRNM
101: GGSLLFVPAG RWLTGNFNLT SHFTLFLHRD AVILASQEES DYEVIEPLPS YGRGRDTDGG RFISLLFGSN LTDVVITGEN GTIDGQGEPW WGKFKRGELK
201: YTRPYLIEIM HSDGIQISNL TFLNSPSWHI HPVYSSNIYI QGLTILAPVT VPNTDGINPD SCTNTRIEDC YIVSGDDCIA VKSGWDQYGI NYGMPTKQLL
301: IRRLTCISPD SAVIALGSEM SGGIEDVRAE DIVAINSESG IRIKTAIGRG GYVKDVYVRG MTMMTMKYVF WMTGSYGSHP DDHYDPKALP VIQNINYQDM
401: VAENVTMPAQ LAGISGDQFT GICISNVTIT LSKKPKKVLW NCTDVSGYTS GVTPQPCQLL PEKQPGTVVP CNFPEDPIPI DEVKLQRCYS RRRNM
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O81746]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.