CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, extracellular, mitochondrion, plastid
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35240	Soybean	extracellular	94.26	48.83
KRH35239	Soybean	extracellular, plasma membrane, plastid	94.67	48.12
KRH35238	Soybean	extracellular	78.69	41.2
KRH08861	Soybean	extracellular	78.69	40.25
KRH38380	Soybean	extracellular	77.87	39.92
KRH48075	Soybean	extracellular	72.95	36.93
PGSC0003DMT400024595	Potato	cytosol	71.31	36.48
KRH48076	Soybean	extracellular	70.49	36.29
KRH06594	Soybean	mitochondrion	72.54	36.05
KRH00832	Soybean	nucleus	70.9	35.74
Bra018004.1-P	Field mustard	cytosol	63.93	35.7
CDY05907	Canola	cytosol	63.93	35.62
KRH40394	Soybean	extracellular, nucleus	70.08	35.33
Bra018023.1-P	Field mustard	extracellular	67.62	35.18
KRH59960	Soybean	nucleus	70.9	35.16
AT3G48950.1	Thale cress	extracellular	67.21	34.97
VIT_16s0050g01120.t01	Wine grape	cytosol	26.64	34.76
Solyc03g007950.2.1	Tomato	extracellular	66.39	34.69
KRH41230	Soybean	nucleus	70.08	34.62
CDY05885	Canola	extracellular	65.16	34.27
CDY08113	Canola	extracellular	63.11	33.77
CDY08095	Canola	extracellular, plasma membrane	67.21	33.13
AT2G23900.1	Thale cress	extracellular	64.34	32.91
CDY20264	Canola	extracellular	63.93	32.64
CDY39678	Canola	extracellular	63.93	32.64
KRH73576	Soybean	extracellular	33.61	29.71
KRH45957	Soybean	extracellular	43.03	23.7
KRH69147	Soybean	nucleus	44.67	23.49
KRH33649	Soybean	nucleus	44.67	23.49
KRG99037	Soybean	nucleus	42.21	23.3
KRH68340	Soybean	nucleus	44.67	23.29
KRG96607	Soybean	extracellular	44.26	23.08
KRH14547	Soybean	extracellular	41.39	22.65
KRH19342	Soybean	endoplasmic reticulum	41.8	20.77
KRH53903	Soybean	extracellular, plasma membrane, plastid	40.57	20.75
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	41.8	20.73
KRH69264	Soybean	extracellular	37.3	20.0
KRH37050	Soybean	extracellular, vacuole	36.89	19.91
KRH02302	Soybean	extracellular	36.48	19.82
KRH50791	Soybean	extracellular	36.48	19.82
Bra032138.1-P	Field mustard	cytosol	63.93	19.5
KRH37525	Soybean	extracellular, plasma membrane	39.34	19.43
KRH12568	Soybean	plastid	38.93	19.43
KRH31843	Soybean	extracellular	35.66	19.08
KRH12027	Soybean	extracellular, vacuole	36.07	18.68
KRG96478	Soybean	endoplasmic reticulum, extracellular	34.84	17.63
KRH68221	Soybean	extracellular	35.66	17.5
VIT_16s0050g01110.t01	Wine grape	extracellular, golgi	71.72	16.65
KRG95330	Soybean	extracellular, plasma membrane, vacuole	23.77	12.45
KRH33610	Soybean	plastid	8.2	11.11
KRH55874	Soybean	cytosol	0.41	1.52

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A0R0ENF6	EMBL:ACUP02012692	EnsemblPlantsGene:GLYMA_20G162700	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlants:KRG91587	ProteinID:KRG91587	ProteinID:KRG91587.1
PFAM:PF00295	PANTHER:PTHR31339	PANTHER:PTHR31339:SF17	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SUPFAM:SSF51126
UniParc:UPI0006EDF9E1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:40028160..40029358

Molecular Weight (calculated)

26395.6 Da

IEP (calculated)

5.798

GRAVY (calculated)

-0.027

Length

244 amino acids

Sequence
(BLAST)

001: MFSDQIQISN LTLVNSPSWF VHPIYSSNIT IKGLTILAPV DSPNTDGIDP DSCTNTRIED CYIVSGDDCV AVKSGWDEYG IKFGKPTQHL VIRRLTCISP
101: DSAVIALGSE MSGGIQDVRV EDIIAISTQS TVRIKTAVGR ALPNITGINY RDVVATNVTY SAKLEGISNA PFTGICISNV SIQVSEQRKK LQWNCTDVAG
201: VTSNVSPNSC QLLPEKGKLG CPFPNDKLPI ENVQLKTCSL KNVF

Best Arabidopsis Sequence Match ( AT3G61490.1 )
(BLAST)

001: MKNILACIVT IITLSNLITI SQGRRVSQSF ETFEYTAIIC RSHSASITEY GGVGDGKTLN TKAFQSAVDH LSQYSSEGGA QLFVPAGKWL TGSFNLTSHF
101: TLFLHKDAIL LAAQDLNEYP ILKALPSYGR GRDAAGGRFA SLIFGTNLSD VIITGNNGTI DGQGSFWWQK FHGGKLKYTR PYLIELMFSD TIQISNLTFL
201: DSPSWNIHPV YSSNIIVKGV TIIAPVKSPN TDGINPDSCT NTRIEDCYII SGDDCIAVKS GWDEYGISFG MPTKHLVIRR LTCISPYSAA IALGSEMSGG
301: IEDVRAEDIT AYQTESGVRI KTAVGRGAFV KNIYVKGMNL HTMKWVFWMT GNYKAHADSH YDPHALPEIT GINYRDIVAE NVSMAGRLEG ISGDPFTGIC
401: ISNATISMAA KHKKAIWMCS DVEGVTSGVD PKPCDLLDGQ ESETTKKKMI DGGCDFPTDV LEIDNVELKT CSYQMS

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS88]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.