Factsheet for GSMUA_Achr11P09300_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P18190_001	Banana	mitochondrion	68.84	68.84
GSMUA_Achr3P10280_001	Banana	mitochondrion	66.8	68.48
VIT_11s0016g00720.t01	Wine grape	extracellular, peroxisome, plastid	68.64	68.36
CDY53228	Canola	extracellular	15.48	67.86
GSMUA_Achr5P22120_001	Banana	extracellular	67.21	67.07
KRH19342	Soybean	endoplasmic reticulum	66.4	66.4
PGSC0003DMT400036866	Potato	extracellular, golgi	65.58	66.12
Solyc03g117750.2.1	Tomato	extracellular, golgi	65.38	65.91
AT3G42950.1	Thale cress	extracellular, golgi	64.56	65.5
PGSC0003DMT400007594	Potato	extracellular	65.99	65.45
Solyc12g009210.1.1	Tomato	nucleus	65.58	65.05
KRH02590	Soybean	extracellular, golgi, mitochondrion, plastid	65.17	65.04
KRH12568	Soybean	plastid	63.95	64.21
TraesCS6B01G371200.2	Wheat	mitochondrion	64.56	64.04
Solyc07g042160.2.1	Tomato	nucleus	63.95	63.56
KRH37525	Soybean	extracellular, plasma membrane	63.95	63.56
AT1G19170.1	Thale cress	cytosol, extracellular, mitochondrion, peroxisome	65.38	63.44
Zm00001d052103_P001	Maize	plasma membrane	63.54	63.03
CDX96676	Canola	extracellular, golgi, plastid	64.97	62.92
Os02t0781000-01	Rice	extracellular	36.46	62.81
EES05901	Sorghum	extracellular, golgi	63.95	62.8
Bra016521.1-P	Field mustard	extracellular, golgi, plastid	64.77	62.72
TraesCS6A01G340000.1	Wheat	mitochondrion	62.93	62.42
CDX83782	Canola	extracellular, golgi, plastid	64.36	62.33
TraesCS6D01G320600.1	Wheat	mitochondrion	62.73	62.22
CDY27797	Canola	extracellular, mitochondrion, plastid	63.34	62.08
Bra039462.1-P	Field mustard	extracellular, mitochondrion, plastid	63.14	61.75
CDY41934	Canola	extracellular, mitochondrion, plastid	62.93	61.55
GSMUA_Achr8P23620_001	Banana	extracellular, golgi, mitochondrion, plasma membrane	61.71	60.72
KRH55874	Soybean	cytosol	7.74	57.58
GSMUA_Achr4P08470_001	Banana	extracellular	40.33	48.18
GSMUA_Achr6P14280_001	Banana	cytosol	38.9	47.51
GSMUA_Achr8P19900_001	Banana	cytosol	39.71	46.99
GSMUA_Achr10P...	Banana	cytosol	38.7	46.12
GSMUA_Achr4P15650_001	Banana	extracellular, plasma membrane, vacuole	38.09	46.06
GSMUA_Achr8P06180_001	Banana	extracellular	36.46	45.55
GSMUA_AchrUn_...	Banana	extracellular	36.46	45.55
GSMUA_Achr7P24560_001	Banana	cytosol, nucleus, vacuole	15.89	44.32
GSMUA_Achr5P00100_001	Banana	cytosol, extracellular, plastid	37.07	43.13
GSMUA_Achr4P05580_001	Banana	cytosol	26.27	41.35
GSMUA_Achr11P...	Banana	cytosol	25.66	40.38
GSMUA_Achr2P08050_001	Banana	cytosol, extracellular, golgi, mitochondrion	35.85	39.82
GSMUA_Achr11P...	Banana	extracellular	38.29	39.5
GSMUA_Achr11P...	Banana	cytosol	24.44	39.34
GSMUA_Achr11P...	Banana	extracellular, vacuole	35.03	38.65
GSMUA_Achr11P...	Banana	extracellular	38.29	34.24
GSMUA_Achr3P27460_001	Banana	extracellular, plastid	11.81	28.86
GSMUA_Achr11P...	Banana	cytosol	37.27	27.64
GSMUA_Achr3P11090_001	Banana	extracellular	22.81	24.14

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575
GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr11G09300_001
EnsemblPlants:GSMUA_Achr11P09300_001	EnsemblPlants:GSMUA_Achr11T09300_001	InterPro:Glyco_hydro_28	InterPro:IPR012334	UniProt:M0RQR0	PFAM:PF00295
PANTHER:PTHR31339	PANTHER:PTHR31339:SF21	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710
SUPFAM:SSF51126	TMHMM:TMhelix	UniParc:UPI0002958624	SEG:seg	:	:

Description

Putative Probable polygalacturonase [Source:GMGC_GENE;Acc:GSMUA_Achr11G09300_001]

Coordinates

chr11:-:7180106..7183549

Molecular Weight (calculated)

54896.1 Da

IEP (calculated)

9.458

GRAVY (calculated)

-0.204

Length

491 amino acids

Sequence
(BLAST)

001: MLSQDARLRH LHRYRRRLLV ALLSHRTLLA VLWTVLFSAV VVWQSGAVGR LGLLRRWAPP PRPCPRLRPT VFNLSDFGGV GDGVTLNTQA FEKAVEAIME
101: FGGSGGGQLN VPPGMWLTGP FNLTSHMTLF LAEGAVIMGI EDYKHWTLMP PLPSYGQGRE LKGPRYGSLI HGQNLRDVVI TGYNGTINGQ GQTWWKRYRQ
201: GLLEHTRGPL VQLMWSRDIV ISNITLQDSP FWTLHPYDCR NVTISNVTIM APLYDAPNTD GIDPDSCEDM VIENSYISVG DDGIAIKSGW DRYGIAYGRP
301: STNILVKNVV LRSKMSAGVS IGSEMSGGIS NIKFENILVW DSRRGVRIKT APGRGGYIHN ISYSNLTFNN LSVGIVIKTD YNEHPDDGFD PKAIPTIRNL
401: TFRGVYGHNV RIPVEIQGSK EILVRGISFQ DMQVGLSYKK KRTFRCSYVE GYAVGPIFPA PCDSLDRYDE NGRLVKRSII QQNVTYTDYE I

Best Arabidopsis Sequence Match ( AT3G42950.1 )
(BLAST)

001: MVRRFLSSHK SLITVFWIAT FASLFIWQFG GVSTNLYSGF SLFWSSSSTT TTVFSGGFPK LRPVVFNLTD FGAVGDGVTI NTEAFEKAIY KISKLAKKGG
101: GQLNVPPGRW LTAPFNLTSY MTLFLSENAE ILALQDEKYW SLLPPLPSYG YGREHHGPRY GSFIHGQNLR DVVVTGNNGS INGQGQTWWK KYRQKLLNHT
201: RGPLVQIMWS SDIVFANITL RDSPFWTLHP YDCKNVTITN MTILAPVFEA PNTDGIDPDS CEDMLIENSY ISVGDDGIAI KSGWDQYGTT YGKPSKNILI
301: RNLIIRSMVS AGISIGSEMS GGVSNITVEN ILIWSSRRGV RIKTAPGRGG YVRDITFRNV TLDELRVGIV IKTDYNEHPD GGFNPQAFPI LENINYTGIY
401: GQGVRVPVRI QGSKEIPVKN VTFRDMSVGI TYKKKHIFQC AYVEGRVIGT IFPAPCDNLD RYDEQERLVK QSDSQNATDI DYEI

Arabidopsis Description

AT3g42950/F18P9_110 [Source:UniProtKB/TrEMBL;Acc:Q9M1L0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.