Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025619_P001 | Maize | mitochondrion | 98.24 | 98.24 |
| TraesCS2A01G337100.1 | Wheat | mitochondrion | 93.31 | 92.98 |
| TraesCS2D01G325800.1 | Wheat | cytosol | 92.96 | 92.63 |
| TraesCS2B01G344800.1 | Wheat | golgi | 92.96 | 92.63 |
| Os04t0462900-02 | Rice | plastid | 89.08 | 85.47 |
| EES07043 | Sorghum | mitochondrion | 83.1 | 83.69 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 72.89 | 81.5 |
| VIT_14s0171g00430.t01 | Wine grape | plastid | 78.52 | 78.8 |
| Bra039086.1-P | Field mustard | plastid | 77.11 | 78.78 |
| CDY00161 | Canola | plastid | 77.11 | 78.78 |
| CDY20055 | Canola | plastid | 77.11 | 78.78 |
| CDX83674 | Canola | plastid | 76.76 | 78.42 |
| CDY13700 | Canola | plastid | 76.76 | 78.42 |
| PGSC0003DMT400041811 | Potato | plastid | 76.76 | 78.14 |
| Bra025263.1-P | Field mustard | plastid | 76.41 | 78.06 |
| PGSC0003DMT400074656 | Potato | plastid | 75.7 | 77.9 |
| Solyc11g010190.1.1 | Tomato | nucleus | 76.41 | 77.78 |
| CDY42555 | Canola | cytosol | 75.7 | 77.62 |
| CDY36378 | Canola | cytosol | 75.7 | 77.62 |
| CDY11712 | Canola | cytosol | 75.7 | 77.62 |
| Bra025548.1-P | Field mustard | cytosol | 75.7 | 77.62 |
| CDX67477 | Canola | extracellular | 75.7 | 77.62 |
| Bra028475.1-P | Field mustard | extracellular | 75.7 | 77.62 |
| AT5G40770.1 | Thale cress | extracellular, plastid | 75.0 | 76.9 |
| KRH44804 | Soybean | mitochondrion | 75.7 | 76.79 |
| KRH56323 | Soybean | mitochondrion | 74.65 | 75.99 |
| AT3G27280.2 | Thale cress | cytosol | 74.65 | 75.99 |
| KRH62783 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 74.3 | 75.63 |
| Solyc05g051510.2.1 | Tomato | nucleus | 73.24 | 75.09 |
| PGSC0003DMT400043286 | Potato | extracellular, plasma membrane | 73.24 | 74.82 |
| Solyc11g013260.1.1 | Tomato | plastid | 75.7 | 71.43 |
| AT5G14300.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 57.39 | 65.46 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 51.76 | 48.04 |
| EER98334 | Sorghum | mitochondrion | 42.25 | 41.52 |
| EER90545 | Sorghum | cytosol, mitochondrion, peroxisome | 41.2 | 40.48 |
Protein Annotations
| EnsemblPlants:EES12301 | EnsemblPlantsGene:SORBI_3006G108600 | EntrezGene:8057482 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Band_7 |
| InterPro:Band_7/SPFH_dom_sf | InterPro:Prohibitin | ncoils:Coil | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF3 | PFAM:PF01145 |
| PRINTS:PR00679 | ProteinID:EES12301 | ProteinID:EES12301.1 | RefSeq:XP_002447973.1 | SEG:seg | SMART:SM00244 |
| SUPFAM:SSF117892 | unigene:Sbi.4090 | UniParc:UPI0001A8700D | UniProt:C5Y9W6 | MapMan:19.4.5.8.1.2.2 | : |
Description
hypothetical protein
Coordinates
chr6:-:47798195..47799451
Molecular Weight (calculated)
30751.0 Da
IEP (calculated)
7.098
GRAVY (calculated)
0.023
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGPAAVSF LTNIAKAAAG LGIAASLTSA SLYTVDGGER AVIFDRFRGV LPETVGEGTH FLVPWLQKPF IFDIRTRPHN FSSNSGTKDL QMVNLTLRLL
101: SRPDVQHLPT IFTSLGLEYD DKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRDALI RRAREFNIIL DDVAITHLSY GIEFSLAVEK KQVAQQEAER
201: SKFLVAKAEQ ERRAAIVRAE GESESARLIS EATAMAGTGL IELRRIEAAK EIAAELARSP NVAYIPSGEN GKMLLGLNAA GFGR
101: SRPDVQHLPT IFTSLGLEYD DKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRDALI RRAREFNIIL DDVAITHLSY GIEFSLAVEK KQVAQQEAER
201: SKFLVAKAEQ ERRAAIVRAE GESESARLIS EATAMAGTGL IELRRIEAAK EIAAELARSP NVAYIPSGEN GKMLLGLNAA GFGR
001: MGSQQAAVSF LSNLAKAAFG LGTAATVLNT SLFTVDGGER AVIFDRFRGV MDQTVGEGTH FLIPILQRPH IFDIRTKPHT FSSISGTKDL QMVNLTLRVL
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
Arabidopsis Description
PHB3Prohibitin-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04331]
SUBAcon: [plastid,extracellular]
SUBAcon: [plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.