Factsheet for Zm00001d025619_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

mitochondrion: 14690504
extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 14690504

F Hochholdinger, L Guo, PS Schnable

Department of Agronomy, Iowa State University, Ames, IA 50011, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12301	Sorghum	plastid	98.24	98.24
TraesCS2A01G337100.1	Wheat	mitochondrion	93.31	92.98
TraesCS2D01G325800.1	Wheat	cytosol	92.96	92.63
TraesCS2B01G344800.1	Wheat	golgi	92.96	92.63
Os04t0462900-02	Rice	plastid	88.38	84.8
Zm00001d016979_P001	Maize	mitochondrion	81.34	81.91
GSMUA_Achr3P20260_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	72.54	81.1
VIT_14s0171g00430.t01	Wine grape	plastid	78.87	79.15
CDY00161	Canola	plastid	76.41	78.06
CDY20055	Canola	plastid	76.41	78.06
Bra039086.1-P	Field mustard	plastid	76.41	78.06
PGSC0003DMT400074656	Potato	plastid	75.7	77.9
CDY13700	Canola	plastid	76.06	77.7
CDX83674	Canola	plastid	76.06	77.7
PGSC0003DMT400041811	Potato	plastid	76.06	77.42
Bra025263.1-P	Field mustard	plastid	75.7	77.34
KRH44804	Soybean	mitochondrion	76.06	77.14
Bra028475.1-P	Field mustard	extracellular	75.0	76.9
Bra025548.1-P	Field mustard	cytosol	75.0	76.9
CDX67477	Canola	extracellular	75.0	76.9
CDY42555	Canola	cytosol	75.0	76.9
CDY36378	Canola	cytosol	75.0	76.9
CDY11712	Canola	cytosol	75.0	76.9
Solyc11g010190.1.1	Tomato	nucleus	75.35	76.7
KRH56323	Soybean	mitochondrion	75.0	76.34
AT5G40770.1	Thale cress	extracellular, plastid	74.3	76.17
KRH62783	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	74.3	75.63
AT3G27280.2	Thale cress	cytosol	73.94	75.27
PGSC0003DMT400043286	Potato	extracellular, plasma membrane	73.59	75.18
Solyc05g051510.2.1	Tomato	nucleus	72.89	74.73
Solyc11g013260.1.1	Tomato	plastid	75.7	71.43
AT5G14300.1	Thale cress	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	57.75	65.86
GSMUA_Achr7P18670_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	51.06	47.39
Zm00001d005485_P001	Maize	mitochondrion	42.96	42.21
Zm00001d034795_P002	Maize	mitochondrion	40.85	40.14
Zm00001d019341_P001	Maize	mitochondrion	8.1	24.73

Protein Annotations

EMBL:AF236369	EMBL:BT087806	EnsemblPlants:Zm00001d025619_P001	EnsemblPlants:Zm00001d025619_T001	EnsemblPlantsGene:Zm00001d025619	EntrezGene:541816
GO:GO:0005575	GO:GO:0016020	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Prohibitin	ncoils:Coil
PANTHER:PTHR23222	PANTHER:PTHR23222:SF3	PFAM:PF01145	PRINTS:PR00679	ProteinID:AQK44096.1	SEG:seg
SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI00000AB672	UniProt:Q9M588	MapMan:19.4.5.8.1.2.2	:

Description

prohibitin2 prohibitin2

Coordinates

chr10:-:124227762..124229007

Molecular Weight (calculated)

30723.0 Da

IEP (calculated)

7.098

GRAVY (calculated)

0.022

Length

284 amino acids

Sequence
(BLAST)

001: MAGGPAAVSF LTNIAKVAAG LGAAASLASA SLYTVDGGER AVIFDRFRGV LPETVGEGTH FLVPWLQKPF IFDIRTRPHN FSSNSGTKDL QMVNLTLRLL
101: SRPDVQHLPT IFTSLGLEYD DKVLPSIGNE VLKAVVAQFN ADQLLTDRPH VSALVRDALI RRAREFNIIL DDVAITHLSY GIEFSLAVEK KQVAQQEAER
201: SKFLVAKAEQ ERRAAIVRAE GESESARLIS EATAMAGTGL IELRRIEAAK EIAAELARSP NVAYIPSGEN GKMLLGLNAT GFGR

Best Arabidopsis Sequence Match ( AT5G40770.1 )
(BLAST)

001: MGSQQAAVSF LSNLAKAAFG LGTAATVLNT SLFTVDGGER AVIFDRFRGV MDQTVGEGTH FLIPILQRPH IFDIRTKPHT FSSISGTKDL QMVNLTLRVL
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR

Arabidopsis Description

PHB3Prohibitin-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04331]
SUBAcon: [plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.