Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
14690504
mitochondrion: 27297264 plasma membrane: 27341663 mitochondrion: 29575040 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07043 | Sorghum | mitochondrion | 94.33 | 94.33 |
| Os02t0580500-01 | Rice | plasma membrane | 86.52 | 86.52 |
| TraesCS6B01G228900.1 | Wheat | unclear | 84.75 | 84.75 |
| TraesCS6D01G225000.1 | Wheat | mitochondrion | 84.4 | 84.4 |
| TraesCS6B01G281500.1 | Wheat | mitochondrion | 83.69 | 83.69 |
| Zm00001d025619_P001 | Maize | mitochondrion | 81.91 | 81.34 |
| TraesCS6A01G198500.1 | Wheat | mitochondrion | 84.4 | 75.56 |
| TraesCS6D01G185000.1 | Wheat | mitochondrion | 84.4 | 75.56 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 67.02 | 74.41 |
| Bra028475.1-P | Field mustard | extracellular | 73.05 | 74.37 |
| Solyc11g010190.1.1 | Tomato | nucleus | 73.4 | 74.19 |
| Bra025263.1-P | Field mustard | plastid | 73.05 | 74.1 |
| CDY36378 | Canola | cytosol | 72.69 | 74.01 |
| CDY42555 | Canola | cytosol | 72.69 | 74.01 |
| CDY11712 | Canola | cytosol | 72.69 | 74.01 |
| Bra025548.1-P | Field mustard | cytosol | 72.69 | 74.01 |
| CDY13700 | Canola | plastid | 72.69 | 73.74 |
| CDX67477 | Canola | extracellular | 72.34 | 73.65 |
| AT5G40770.1 | Thale cress | extracellular, plastid | 72.34 | 73.65 |
| PGSC0003DMT400041811 | Potato | plastid | 72.69 | 73.48 |
| CDY20055 | Canola | plastid | 72.34 | 73.38 |
| CDY00161 | Canola | plastid | 72.34 | 73.38 |
| CDX83674 | Canola | plastid | 72.34 | 73.38 |
| Bra039086.1-P | Field mustard | plastid | 72.34 | 73.38 |
| VIT_14s0171g00430.t01 | Wine grape | plastid | 73.05 | 72.79 |
| KRH56323 | Soybean | mitochondrion | 71.99 | 72.76 |
| PGSC0003DMT400043286 | Potato | extracellular, plasma membrane | 71.63 | 72.66 |
| PGSC0003DMT400074656 | Potato | plastid | 70.92 | 72.46 |
| Solyc05g051510.2.1 | Tomato | nucleus | 70.92 | 72.2 |
| KRH62783 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 70.92 | 71.68 |
| AT3G27280.2 | Thale cress | cytosol | 70.92 | 71.68 |
| KRH44804 | Soybean | mitochondrion | 69.15 | 69.64 |
| HORVU6Hr1G047300.2 | Barley | plasma membrane | 84.75 | 69.08 |
| Solyc11g013260.1.1 | Tomato | plastid | 70.57 | 66.11 |
| AT5G14300.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 55.32 | 62.65 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 46.1 | 42.48 |
| Zm00001d005485_P001 | Maize | mitochondrion | 41.49 | 40.48 |
| Zm00001d034795_P002 | Maize | mitochondrion | 41.13 | 40.14 |
| Zm00001d019341_P001 | Maize | mitochondrion | 7.09 | 21.51 |
Protein Annotations
| EMBL:BT085927 | EnsemblPlants:Zm00001d016979_P001 | EnsemblPlants:Zm00001d016979_T001 | EnsemblPlantsGene:Zm00001d016979 | EntrezGene:541817 | GO:GO:0005575 |
| GO:GO:0016020 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | InterPro:Prohibitin | ncoils:Coil | PANTHER:PTHR23222 |
| PANTHER:PTHR23222:SF3 | PFAM:PF01145 | PRINTS:PR00679 | ProteinID:AQK72072.1 | SEG:seg | SMART:SM00244 |
| SUPFAM:SSF117892 | UniParc:UPI0001A4BBCE | UniProt:C4J530 | MapMan:19.4.5.8.1.2.2 | : | : |
Description
prohibitin3 prohibitin3
Coordinates
chr5:-:181869280..181870764
Molecular Weight (calculated)
30586.7 Da
IEP (calculated)
7.891
GRAVY (calculated)
-0.054
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGQAAIS FMTRMAKVAA GLGVAASAAS TSFYTVDGGE RAVIFDRVRG VLPRTMSEGT HLLVPILQKP FIFDIRTRPH SFSSTSGTKD LQMVSLTLRV
101: LSRPDVEHLP DIFTSLGLEY DEKVLPSIGN EVLKAVVAQF NADQLLTERP HVSALVRESL TKRAREFNIV LDDVAITHLA YGQEFAQAVE KKQVAQQEAE
201: RSRFLVARAE QERRAAIVRA EGESEAARLI SEATTTAGNG LIELRRIEAA KEIASVLSRT PNVSYIPAGD NGQMLLGLNA AR
101: LSRPDVEHLP DIFTSLGLEY DEKVLPSIGN EVLKAVVAQF NADQLLTERP HVSALVRESL TKRAREFNIV LDDVAITHLA YGQEFAQAVE KKQVAQQEAE
201: RSRFLVARAE QERRAAIVRA EGESEAARLI SEATTTAGNG LIELRRIEAA KEIASVLSRT PNVSYIPAGD NGQMLLGLNA AR
001: MGSQQAAVSF LSNLAKAAFG LGTAATVLNT SLFTVDGGER AVIFDRFRGV MDQTVGEGTH FLIPILQRPH IFDIRTKPHT FSSISGTKDL QMVNLTLRVL
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
Arabidopsis Description
PHB3Prohibitin-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04331]
SUBAcon: [plastid,extracellular]
SUBAcon: [plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.