Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
21043471
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G228900.1 | Wheat | unclear | 88.89 | 99.29 |
| TraesCS6D01G185000.1 | Wheat | mitochondrion | 99.05 | 99.05 |
| TraesCS6D01G225000.1 | Wheat | mitochondrion | 88.25 | 98.58 |
| TraesCS6B01G281500.1 | Wheat | mitochondrion | 86.98 | 97.16 |
| Os02t0580500-01 | Rice | plasma membrane | 76.51 | 85.46 |
| EES07043 | Sorghum | mitochondrion | 76.19 | 85.11 |
| Zm00001d016979_P001 | Maize | mitochondrion | 75.56 | 84.4 |
| HORVU6Hr1G047300.2 | Barley | plasma membrane | 88.25 | 80.35 |
| TraesCS2A01G337100.1 | Wheat | mitochondrion | 72.38 | 80.0 |
| Solyc11g010190.1.1 | Tomato | nucleus | 66.67 | 75.27 |
| PGSC0003DMT400074656 | Potato | plastid | 65.4 | 74.64 |
| PGSC0003DMT400041811 | Potato | plastid | 66.03 | 74.55 |
| VIT_14s0171g00430.t01 | Wine grape | plastid | 66.67 | 74.2 |
| Solyc05g051510.2.1 | Tomato | nucleus | 65.08 | 74.01 |
| PGSC0003DMT400043286 | Potato | extracellular, plasma membrane | 65.08 | 73.74 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 59.37 | 73.62 |
| KRH56323 | Soybean | mitochondrion | 64.44 | 72.76 |
| Bra025548.1-P | Field mustard | cytosol | 63.81 | 72.56 |
| Bra028475.1-P | Field mustard | extracellular | 63.81 | 72.56 |
| CDY42555 | Canola | cytosol | 63.81 | 72.56 |
| CDY36378 | Canola | cytosol | 63.81 | 72.56 |
| CDY11712 | Canola | cytosol | 63.81 | 72.56 |
| AT5G40770.1 | Thale cress | extracellular, plastid | 63.49 | 72.2 |
| CDX83674 | Canola | plastid | 63.49 | 71.94 |
| CDX67477 | Canola | extracellular | 63.17 | 71.84 |
| KRH62783 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 63.49 | 71.68 |
| Bra025263.1-P | Field mustard | plastid | 63.17 | 71.58 |
| CDY13700 | Canola | plastid | 63.17 | 71.58 |
| KRH44804 | Soybean | mitochondrion | 63.49 | 71.43 |
| CDY20055 | Canola | plastid | 62.86 | 71.22 |
| CDY00161 | Canola | plastid | 62.86 | 71.22 |
| Bra039086.1-P | Field mustard | plastid | 62.86 | 71.22 |
| AT3G27280.2 | Thale cress | cytosol | 62.22 | 70.25 |
| Solyc11g013260.1.1 | Tomato | plastid | 65.71 | 68.77 |
| AT5G14300.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 49.52 | 62.65 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 43.49 | 44.77 |
| TraesCS1A01G407100.1 | Wheat | plastid | 37.46 | 40.97 |
| TraesCS4A01G344900.1 | Wheat | mitochondrion, plastid | 26.03 | 30.6 |
| TraesCS4A01G346300.1 | Wheat | mitochondrion, plastid | 21.59 | 23.29 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G198500.1 | EnsemblPlantsGene:TraesCS6A01G198500 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf |
| InterPro:Prohibitin | ncoils:Coil | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF3 | PFAM:PF01145 | PRINTS:PR00679 |
| SEG:seg | SMART:SM00244 | SUPFAM:SSF117892 | TIGR:cd03401 | TMHMM:TMhelix | MapMan:19.4.5.8.1.2.2 |
Description
No Description!
Coordinates
chr6A:-:306046386..306047586
Molecular Weight (calculated)
34490.6 Da
IEP (calculated)
7.147
GRAVY (calculated)
0.157
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGQAAVS FLTKLAKVAA GLGLTASAVS TSLYTVDGGQ RAVIFDRFQG VLPAVVSEGT HFLVPWLQKP FLFDIRTRPH SFSSTSGTKD LQMVSLTLRV
101: LARPDVERLP EIFTNLGLDY DDKVLPSIGN EVLKAVVAQF NADQLLTDRP HVSALVREAL VRRAGEFNIV LDDVAITHLA YGHDFAQAVE KKQVAQQEAE
201: RSRFLVARAE QERRAAIVRA EGESESARLI SDATALVGNG LIELRRIEAA KEIAGVIARS PNVSYIPSGN NGQMLLGLST ARDMVLNGYC SEATWFLNYW
301: FHLLFFLIKV LLLFC
101: LARPDVERLP EIFTNLGLDY DDKVLPSIGN EVLKAVVAQF NADQLLTDRP HVSALVREAL VRRAGEFNIV LDDVAITHLA YGHDFAQAVE KKQVAQQEAE
201: RSRFLVARAE QERRAAIVRA EGESESARLI SDATALVGNG LIELRRIEAA KEIAGVIARS PNVSYIPSGN NGQMLLGLST ARDMVLNGYC SEATWFLNYW
301: FHLLFFLIKV LLLFC
001: MGSQQAAVSF LSNLAKAAFG LGTAATVLNT SLFTVDGGER AVIFDRFRGV MDQTVGEGTH FLIPILQRPH IFDIRTKPHT FSSISGTKDL QMVNLTLRVL
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
Arabidopsis Description
PHB3Prohibitin-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04331]
SUBAcon: [plastid,extracellular]
SUBAcon: [plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.